Re: CCL:Tool for secondary structure prediction

 Dear Dr. Steinbrecher,
 (1) Try
 (2) VEGA (freeware!) also has an interface w/ PREDICTOR	 suite.
 Both require sequence in FASTA format.
 On Thu, 7 Aug 2003, Thomas Steinbrecher wrote:
 > Dear CCLers,
 > I am looking for a tool to predict secondary structure
 > elements for a protein of known sequence but without
 > 3D-structure. There are no homologues with known structure.
 > Please point me to references for a program (ideally open
 > source/freeware) that can do such a thing.
 > Kind Regards,
 > Thomas Steinbrecher
 > -= This is automatically added to each message by mailing script =-
 > To send e-mail to subscribers of CCL put the string CCL: on your Subject:
 > and send your message to:
 > Send your subscription/unsubscription requests to:
 > HOME Page:   | Jobs Page:
 > If your mail is bouncing from CCL.NET domain send it to the maintainer:
 > Jan Labanowski, (read about it on CCL Home Page)
 > -+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+
 Andre Mauricio de Oliveira
 VOICE +55-031-374-1325
 FAX   +55-031-499-5700
 Laboratorio de QSAR e Modelagem Molecular
 Nucleo de Estudos em Quimica Medicinal (NEQUIM)
 NEQUIM's Homepage:
 Departamento de Quimica ICEx
 Federal University of Minas Gerais
 Av Antonio Carlos 6627 Pampulha ZIP CODE 31270-901
 Belo Horizonte MG Brazil