Re: CCL:why autogrid3 can't run on my DEC alpha?

[Lin Kui <linkui &$at$& bic.nus.edu.sg>]

Hello, Edgar,
 the attached file is the autogrid makefile I used to re-compile.
 Thanks a lot.
 Yours
 Kui Lin
 --
 Kui Lin
 BIC-IMCB Bioinformatics Group
 Institute of Molecular and Cell Biology
 30 Medical Drive, Singapore 117609
 e-mail: linkui &$at$& bic.nus.edu.sg phone: (+65) 874-3367

#
 #  Makefile to build AutoGrid from Object files.
 #
 #  (c) 1999, TSRI
 #  Garrett M. Morris
 #
 BIN = .
 OBJS = main.o \
        check_size.o \
        setflags.o \
        timesys.o \
        timesyshms.o \
        printhms.o \
        prHMSfixed.o \
        printdate.o \
        strindex.o \
        banner.o \
        gpfparser.o
 LNS = \
       main.ln \
       check_size.ln \
       setflags.ln \
       timesyshms.ln \
       timesys.ln \
       printhms.ln \
       prHMSfixed.ln \
       printdate.ln \
       banner.ln \
       gpfparser.ln \
       strindex.ln
 LIB	= -lm
 PROF	= #						no profiling
 # PROF	= -p # for profilable code
 DBUG	= #						no debugging
 # DBUG	= -g # for dbx
 # DBUG	= -DDEBUG #					turn on DEBUG code
 # CFLAGS = $(PROF) $(DBUG) # Silicon Graphics
 CFLAGS = -std -verbose $(PROF) $(DBUG) # DEC Alpha, Convex
 # CFLAGS = -Aa -D_HPUX_SOURCE $(PROF) $(DBUG) #	Hewlett-Packard
 # OPT	= -O3 -n32 -mips4 $(CFLAGS) # IRIX64 Silicon Graphics
 # OPT	= -O3 -r4000 $(CFLAGS) # IRIX5 Silicon Graphics
 OPT	= -O4 -ifo $(CFLAGS)	# DEC Alpha
 # OPT	= -O2 -ur $(CFLAGS) # Convex
 # OPT = -O2 $(CFLAGS) # Sun
 # OPT	= -O +O3 +Obb2048 $(CFLAGS) # Hewlett-Packard
 # OPT	= $(CFLAGS) #	-g debugging
 # OPTLIM	= # Sun, Silicon Graphics Octane/IRIX6
 OPTLIM = -Olimit 2048 # Hewlett-Packard, DEC Alpha
 # OPTLIM = # Convex
 # OPTLIM = # -g debugging
 LINKOPT = $(OPT) # most compilers
 # LINKOPT = -O2 -r4000 $(CFLAGS) # IRIX5 Silicon Graphics
 LINT = lint # C code checking
 LINTFLAGS = $(LIB) -lansi -c # DEC-Alpha # MA
 # LINTFLAGS = -DHPPA -D_HPUX_SOURCE -Aa $(LIB) -c #	HP/Hewlett-Packard
 # LINTFLAGS = -Aa $(LIB) -c #	HP/Hewlett-Packard Alt
 # LINTFLAGS = $(LIB) -n -lansic #	Sun Sparc
 autogrid3 : $(OBJS)
 	echo $(BIN) on `date` using' >>> ' `hostname` ' <<<' >>
 LATEST_MAKE
 	$(CC) $(LINKOPT) -o $ &$at$&  $(OBJS) $(LIB)
 convertmap : convertmap.o
 	$(CC) $(OPT) -o $ &$at$&  convertmap.o $(LIB)
 lcheck :  $(LNS)
 	$(LINT) -lansi $(LIB) $(LNS)
 main.o : main.c autogrid.h autoglobal.h
 	$(CC) $(OPT) $(OPTLIM) -c main.c
 check_size.o : check_size.c autogrid.h
 	$(CC) $(OPT) -c check_size.c
 setflags.o : setflags.c autogrid.h
 	$(CC) $(OPT) -c setflags.c
 timesyshms.o : timesyshms.c autogrid.h
 	$(CC) $(OPT) -c timesyshms.c
 timesys.o : timesys.c autogrid.h
 	$(CC) $(OPT) -c timesys.c
 printhms.o : printhms.c autogrid.h
 	$(CC) $(OPT) -c printhms.c
 prHMSfixed.o : prHMSfixed.c autogrid.h
 	$(CC) $(OPT) -c prHMSfixed.c
 printdate.o : printdate.c autogrid.h
 	$(CC) $(OPT) -c printdate.c
 banner.o : banner.c autogrid.h
 	$(CC) $(OPT) -c banner.c
 gpfparser.o : gpfparser.c autogrid.h gpftoken.h
 	$(CC) $(OPT) -c gpfparser.c
 strindex.o : strindex.c autogrid.h
 	$(CC) $(OPT) -c strindex.c
 convertmap.o : convertmap.c
 	$(CC) $(OPT) -c convertmap.c
 #
 #  lcheck dependencies...
 #
 main.ln : main.c autogrid.h autoglobal.h
 	$(LINT) $(LINTFLAGS) $?
 check_size.ln : check_size.c autogrid.h
 	$(LINT) $(LINTFLAGS) $?
 setflags.ln : setflags.c autogrid.h
 	$(LINT) $(LINTFLAGS) $?
 timesyshms.ln : timesyshms.c autogrid.h
 	$(LINT) $(LINTFLAGS) $?
 timesys.ln : timesys.c autogrid.h
 	$(LINT) $(LINTFLAGS) $?
 printhms.ln : printhms.c autogrid.h
 	$(LINT) $(LINTFLAGS) $?
 prHMSfixed.ln : prHMSfixed.c autogrid.h
 	$(LINT) $(LINTFLAGS) $?
 printdate.ln : printdate.c autogrid.h
 	$(LINT) $(LINTFLAGS) $?
 banner.ln : banner.c autogrid.h
 	$(LINT) $(LINTFLAGS) $?
 gpfparser.ln : gpfparser.c autogrid.h gpftoken.h
 	$(LINT) $(LINTFLAGS) $?
 strindex.ln : strindex.c autogrid.h
 	$(LINT) $(LINTFLAGS) $?
 #
 #  Remove objects, lint files, cores, etc.
 #
 clean:
 	/bin/rm -rf *.o *.s *.ln a.out core autogrid3 convertmap
 #
 #  DEC Alpha
 #
 openalpha :
 	/bin/cp -f obj.alpha/*.o .
 	/bin/cp -f obj.alpha/*.ln .
 closealpha :
 	/bin/mv -f *.o obj.alpha
 	/bin/mv -f *.ln obj.alpha
 #
 #  Convex
 #
 openc2 :
 	/bin/cp -f obj.c2/*.o .
 	/bin/cp -f obj.c2/*.ln .
 closec2 :
 	/bin/mv -f *.o obj.c2
 	/bin/mv -f *.ln obj.c2
 #
 #  Hewlett-Packard Precision Architecture
 #
 openhppa :
 	/bin/cp -f obj.hppa/*.o .
 	/bin/cp -f obj.hppa/*.ln .
 closehppa :
 	/bin/mv -f *.o obj.hppa
 	/bin/mv -f *.ln obj.hppa
 #
 #  Silicon Graphics
 #
 opensgi4D :
 	/bin/cp -f obj.sgi4D/*.o .
 	/bin/cp -f obj.sgi4D/*.ln .
 closesgi4D :
 	/bin/mv -f *.o obj.sgi4D
 	/bin/mv -f *.ln obj.sgi4D
 #
 #  Sun
 #
 opensun4 :
 	/bin/cp -f obj.sun4/*.o .
 	/bin/cp -f obj.sun4/*.ln .
 closesun4 :
 	/bin/mv -f *.o obj.sun4
 	/bin/mv -f *.ln obj.sun4
 #
 #  Architecture
 #
 openxxx :
 	/bin/cp -f obj.xxx/*.o .
 	/bin/cp -f obj.xxx/*.ln .
 closexxx :
 	/bin/mv -f *.o obj.xxx
 	/bin/mv -f *.ln obj.xxx