CCL: Cartesian Coordinate Transformation
- From: Michel Petitjean <ptitjean|itodys.jussieu.fr>
- Subject: CCL: Cartesian Coordinate Transformation
- Date: Thu, 4 May 2006 18:11:41 +0200 (MEST)
Sent to CCL by: Michel Petitjean [ptitjean:-:itodys.jussieu.fr]
To: "CCL Subscribers" <chemistry-,-ccl.net>
Subject: CCL: Re: G: Cartesian Coordinate Transformation
How many times should be published and republished the quaternion solution
of the RMS problem ?
Furthermore, it is simpler to use the vector expression of the quaternion
rather than its 4*4 matricial formulation.
There are practical details in my two papers in J.Math.Phys:
1999, 40(9), 4587-4595 (see the appendix)
2002, 43(8), 4147-4157 (see appendix A.5 for the extension to nfinite or/and
continuous distributions of points)
See also:
http://petitjeanmichel.free.fr/itoweb.petitjean.shape.html
Sent to CCL by: Paul Fleurat-Lessard [Paul.Fleurat-Lessard(a)ens-lyon.fr]
> ...
> As already mentionned, you can play with the iniertia tensor, but this=20
> can lead to orientation problem. I think that a more robust way is to=20
> use quaternion procedure as in the rmsd calculation.
> You can find details in:
> J Comput Chem 25: 1849 =AD1857, 2004, 'Using Quaternions to Calculate=20
> RMSD' , EVANGELOS A. COUTSIAS, CHAOK SEOK, KEN A. DILL
> ...
Michel Petitjean, Email: petitjean-,-itodys.jussieu.fr
ITODYS (CNRS, UMR 7086) ptitjean-,-ccr.jussieu.fr
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http://petitjeanmichel.free.fr/itoweb.petitjean.html