Subject: CCL: Protonated Side-chains

From: Alessandro Pandini <[email-masked]>
Date: Fri, 14 Apr 2000 10:36:52 +0200

Dear all,

I have a protein obtained by homology modelling.
I'd like to properly protonate the sidechain of the active site.
I have some good ideas, but I'm looking for guidelines.
Does anyone know a good review about?
Is there anyone around who has already dealt with this problem?

Thanks
Alex