Subject: problem in capping peptide using insightII

From: [email-masked]
Date: Wed, 11 Oct 2000 16:17:43 +0530 (IST)

i am working on the simulation of peptides using insightII v 95.I am
facing two problems:
1.after i cap the protein be it using charges or uncharged the peptide is
losing its partial double bond character
2. i am unable to remove charges from the peptide
pl. write to me as to what is to be done now.i am working on this problem
for 3 weeks but so far could not find any solution.my work has stalled due
to this. kindly tell me a solution.
with regards
manjari