Subject: autodock, mkdpf3

From: "Carsten Detering" <[email-masked]>
Date: Fri, 18 Jan 2002 02:38:33 +0100

hi fellow autodock users,

does any of you know why my mkdpf3 and mkgpf3 work only in my home (~)
directory?? it is really anoying to always copy the files needed to create
the .dpf and .gpf files there. even if i specify the whole path to my .pdbq
and .pdbqs files, it doesent work (that appeared to be the problem with the
mol2topdbq scripts, among others). i am working on sgi irix 6.5.
further, has anyone of you calibrated the free energy coefficients for
different systems than proteins??
thank you for any useful answers

carsten

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Carsten Detering, Ph. D.
Varani Research Group
University of Washington
email: [email-masked]