Subject: help for NAMD

From: wei <[email-masked]>
Date: Fri, 20 Dec 2002 13:16:19 -0500

Dear all:

When I use NAMD to run the equilibration of a small system. it keep saying: 
"Warning: Not all atoms have unique coordinates."
and
"Warning: xxx margin violations detected during timestep xxx."
but I checked the coordinates file and everything looks fine. could anybody tell me what is wrong?

regards
wei