Subject: Re: CCL:Free software to identify and characterize internal cavities within proteins

From: Marc Ceruso <mceruso|at|physbio.mssm.edu>
Date: Fri, 19 Dec 2003 11:41:10 -0500

Hello-

I think SURFNET by Roman Laskowski may work for you
http://www.biochem.ucl.ac.uk/~roman/surfnet/surfnet.html
Cheers
Marc

________________________________________________________________________________

    Department of Physiology & Biophysics
    Mt Sinai School of Medicine
    One Gustave L. Levy Place
    New York NY 10029

    Tel  : 212-241 82 93
    Fax  : 212-860 33 69
    mceruso|at|physbio.mssm.edu
________________________________________________________________________________

On Fri, 19 Dec 2003, LEDM (Leonardo De Maria) wrote:

> > Hi everyone,
> >
> > we are interested in a free software to identify and characterize internal cavities within proteins.
> >
> > The information we would like to have is: size of the cavity (volume and surface) and protein atoms belonging
> > to it.
> >
> > Any help from out there? I'll summarize the answers.
> >
> > Thanks is advance and happy holidays,
> >
> > Leonardo De Maria, Ph.D.
> > Research Scientist
> > Novozymes A/S
> > Smxrmosevej 25
> > 2880 Bagsvfrd
> > Denmark
> >
> > Phone:  +45 44421890
> > Fax:      +45 44980246
> >
> > e.mail: ledm|at|novozymes.com
> >
> >
>