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To: CHEMISTRY<<at>>ccl.net
Subject: CCL:  ACS COMP Division:  Building an Instant Supercomputer at ACS meeting in Philadelphia
From: Michelle Francl-Donnay <mfrancl<<at>>brynmawr.edu>
Date: Tue, 27 Jul 2004 18:19:03 -0400
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Build an instant supercomputer using laptops you may have around the=20
lab.

The FlashMob I (http://www.flashmobcomputing.org/)  organizers and the=20=

COMP division are teaming up to build a 48-node supercomputer in a day=20=

and use it to solve an interesting chemical problem.   The event will=20
be held at the ACS National Meeting in Philadelphia on Wednesday,=20
August 25.

  A FlashMob is a unique way to assemble a temporary (yes temporary!)=20
supercomputer out of laptops, desktops, and the like that you just have=20=

"laying around the house."=A0=A0=A0 Unlike computer clusters that are=20
permanently assembled and need highly trained staff for their care and=20=

feeding, a FlashMob cluster is assembled by simply rebooting a=20
collection of computers with a special CD to run one problem.=A0 When =
the=20
problem is done, you take out the CD and the notebooks and desktops go=20=

back to their mundane, day-to-day existence.=A0=A0 For "Chemistry by=20
FlashMob 2004," we will be creating a one-day supercomputer out of 48=20
ordinary laptops to run a NAMD molecular dynamics problem.=A0 Take the=20=

disk home, collect some computers in your laboratory,
and build your own supercomputer too!
=A0
The spores of Bacillus anthracis (anthrax) have been used as a=20
biological weapon against the military and the civilian population.=20
Protection against anthrax infection is a national homeland defense=20
priority. The goal of =93Chemistry by FlashMob 2004=94 is to compute the=20=

structural motion and necessary transitions in the sequestration of CaM=20=

by EF using steered molecular dynamics. Large scale computational=20
resources are required for this project. The challenge is to use the=20
FlashMob event to complete the simulation using NAMD.

Interested in participating?  Sign up to have your laptop participate=20
by sending an e-mail to mfrancl<<at>>brynmawr.edu with the subject =93FlashMob=20=

2004 Volunteer=94.  Want to see how it all works?  Drop by with your=20
lunch to see how many GFlops we are getting.  We will have available a=20=

CD with software to enable you to set up your own system on the fly.  =20=

One of the minds behind FlashMob I will be there to answer questions. =20=

We will have a smaller set-up available for those who want to see how=20
easy these systems can be to create.

Requirements for volunteers:

Participating laptops must have 2.0 GHz or better P4 or Celeron, 256 M=20=

or better RAM.  You must be willing to leave your laptop and its power=20=

adapter in the cluster from the morning set-up until after lunch.  The=20=

laptops will be attended throughout the event and we will have security=20=

systems in place to assure that you and your laptop will be reunited at=20=

the end of the event.  Please note that nothing is written to your=20
laptop hard drive, we boot directly from a CD!

COMP thanks Semichem for their support of the inaugural Chemistry by=20
FlashMob event.
=A0


Michelle M. Francl
COMP chair, 2004

Professor of Chemistry
Bryn Mawr College
101 N Merion Ave
Bryn Mawr, PA 19010

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<fontfamily><param>Times</param>Build an instant supercomputer using
laptops you may have around the lab. =20


The FlashMob I
=
(<underline><color><param>0000,0000,FFFF</param>http://www.flashmobcomputi=
ng.org/</color></underline>)=20
organizers and the COMP division are teaming up to build a 48-node
supercomputer in a day and use it to solve an interesting chemical
problem.   The event will be held at the ACS National Meeting in
Philadelphia on Wednesday, August 25. =20


 A FlashMob is a unique way to assemble a temporary (yes temporary!)
supercomputer out of laptops, desktops, and the like that you just
have "laying around the house."=A0=A0=A0 Unlike computer clusters that =
are
permanently assembled and need highly trained staff for their care and
feeding, a FlashMob cluster is assembled by simply rebooting a
collection of computers with a special CD to run one problem.=A0 When
the problem is done, you take out the CD and the notebooks and
desktops go back to their mundane, day-to-day existence.=A0=A0 For
"Chemistry by FlashMob 2004," we will be creating a one-day
supercomputer out of 48 ordinary laptops to run a NAMD molecular
dynamics problem.=A0 Take the disk home, collect some computers in your
laboratory,

and build your own supercomputer too!

=A0

The spores of Bacillus anthracis (anthrax) have been used as a
biological weapon against the military and the civilian population.
Protection against anthrax infection is a national homeland defense
priority. The goal of =93Chemistry by FlashMob 2004=94 is to compute the
structural motion and necessary transitions in the sequestration of
CaM by EF using steered molecular dynamics. Large scale computational
resources are required for this project. The challenge is to use the
FlashMob event to complete the simulation using NAMD. =20


Interested in participating?  Sign up to have your laptop participate
by sending an e-mail to
=
<underline><color><param>0000,0000,FFFF</param>mfrancl<<at>>brynmawr.edu</color=
></underline>
with the subject =93FlashMob 2004 Volunteer=94.  Want to see how it all
works?  Drop by with your lunch to see how many GFlops we are getting.=20=

We will have available a CD with software to enable you to set up your
own system on the fly.   One of the minds behind FlashMob I will be
there to answer questions.  We will have a smaller set-up available
for those who want to see how easy these systems can be to create. =20


Requirements for volunteers:


Participating laptops must have 2.0 GHz or better P4 or Celeron, 256 M
or better RAM.  You must be willing to leave your laptop and its power
adapter in the cluster from the morning set-up until after lunch.  The
laptops will be attended throughout the event and we will have
security systems in place to assure that you and your laptop will be
reunited at the end of the event.  Please note that nothing is written
to your laptop hard drive, we boot directly from a CD!


COMP thanks Semichem for their support of the inaugural Chemistry by
FlashMob event.

=A0


</fontfamily>

Michelle M. Francl

COMP chair, 2004


Professor of Chemistry

Bryn Mawr College

101 N Merion Ave

Bryn Mawr, PA 19010


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