From owner-chemistry@ccl.net Fri Mar 31 11:56:00 2006 From: "Robert Hinde rhinde..utk.edu" To: CCL Subject: CCL:G: multipole moment units in Gaussian 03 Message-Id: <-31372-060331114726-26179-aZ988CprVquyQHW7TdE9KQ|*|server.ccl.net> X-Original-From: "Robert Hinde" Date: Fri, 31 Mar 2006 11:47:24 -0500 Sent to CCL by: "Robert Hinde" [rhinde---utk.edu] I am using Gaussian 03 Revision B.05 to compute molecular quadrupole moments. It appears to me that the traceless quadrupole moments reported by Gaussian are in atomic units, although the units given in the output are said to be Debye-Angstroms. Does anyone know which units Gaussian 03 is using here? This raises the question about the higher order moments as well; are they in atomic units or Debye- Angstroms^n? Thanks for any help you can provide. Robert Hinde Univ. of Tennessee rhinde^-^utk.edu From owner-chemistry@ccl.net Fri Mar 31 13:56:01 2006 From: "Mikhail Ladanov mladanov:mail.usf.edu" To: CCL Subject: CCL: XYZ to PDB translation Message-Id: <-31373-060331135243-1679-j7gRUgTkyPpJtYUI/M/DWw~~server.ccl.net> X-Original-From: "Mikhail Ladanov" Date: Fri, 31 Mar 2006 13:52:41 -0500 Sent to CCL by: "Mikhail Ladanov" [mladanov/./mail.usf.edu] I work with MD simulations of system with very big number of atoms. Im trying to translate my XYZ file into PDB using OpenBabel 2.0 As soon as I have a file of size about 15-20 Mb, Babel results with segmentation fault. I have therefore 2 questions: 1. Is there any way to make OpenBabel work with big files without any errors? 2. Is there any other utility I could translate XYZ to PDB with?