From owner-chemistry@ccl.net Sat Aug 24 14:51:00 2013 From: "Willy Offermans Willy*Offermans.Rompen.nl" To: CCL Subject: CCL: Getting short contact data for molecule built with Gaussview Message-Id: <-49106-130824085928-25627-P0GL1OO8xxROfCAbCpILZA:server.ccl.net> X-Original-From: Willy Offermans Content-Disposition: inline Content-Transfer-Encoding: 8bit Content-Type: text/plain; charset=utf-8 Date: Sat, 24 Aug 2013 14:59:17 +0200 MIME-Version: 1.0 Sent to CCL by: Willy Offermans [Willy^^Offermans.Rompen.nl] Hello Adedapo, Write a script to calculate all possible distances between the atoms in a molecule and order the list by length. For an experienced person, it is half an hour work, for the unexperienced a good lesson in programming. On Fri, Aug 23, 2013 at 11:25:49AM +0200, Adedapo Adeyinka u11335132.:.tuks.co.za wrote: > Dear All, > I want to determine the distances of all the short contacts > in a molecule I built with Gaussview and saved as a mol2 file. Does anyone > know how to get this information automatically using gaussview or mercury? > or is there any software that I can get for free to extract this data for > me. > I will be glad if anyone can help me out. > > > Thanks > > Adedapo. > > -- > This message and attachments are subject to a disclaimer. Please refer to > http://www.it.up.ac.za/documentation/governance/disclaimer/ for full > details. -- Met vriendelijke groeten, With kind regards, Mit freundlichen Gruessen, Willy ************************************* Dr. W.K. Offermans CAT Fellow CAT Catalytic Center Institut für Technische und Makromolekulare Chemie RWTH Aachen Worringerweg 1, Raum 38C-150 D-52074 Aachen, Germany Phone: +49 241 80 28592 Fax: +49 241 80 22593 Home: +31 45 544 49 44 Mobile: +31 681 15 87 68 e-mail: Willy:Offermans.Rompen.nl e-mail: Willy.Offermans:CatalyticCenter.RWTH-Aachen.de