From chemistry-request@www.ccl.net  Thu Jan 21 02:50:05 1999
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Date: Thu, 21 Jan 1999 08:50:13 +0100 (MET)
From: Sergiusz Kwasniewski <skwasnie@luc.ac.be>
To: CCL <chemistry@www.ccl.net>
Subject: MOPAC-MECI
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Dear CCL'ers,

I have a question concerning the MECI calculation inside MOPAC93R2.
In the manual they mention a MECI calculation up till C.I.=8. But this
only gives good results in addition with some other keywords, like MICROS.

Now my question is the following: can I for example use a C.I.=10 or more,
in combination with CIS (is this one of the additional keywords), without
changing the NMECI parameter in SIZES? I guess that it should work quite
well, as CIS puts a big restriction on the microstates that are possibly
going to be considered. (NMECI is currently set to 11, i.e. 32 microstates
for C.I.=8 and 50 for C.I.=10).

Thanks in advance,

S. Kwasniewski

******************************

Sergiusz P. Kwasniewski

Limburgs Universitair Centrum
Universitaire Campus, Gebouw D
3590 Diepenbeek
BELGIUM
Tel. (+32) (0)11/26.83.15
Fax. (+32) (0)11/26.83.01

e-mail:
sergiusz.kwasniewski@luc.ac.be

******************************


From chemistry-request@www.ccl.net  Wed Jan 20 03:38:25 1999
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Subject: Looking for original 1993 source version of US GAMESS
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      We are looking for copy of the original source version
of US GAMESS from 1993 (not the later versions !). Unfortunately
this particular version has not been archived by GAMESS developers
and we only hope now that someone preserved it in private archives.
Please respond directly to gora@pkmk486.ch.pwr.wroc.pl 
                    or dziekons@pkmk486.ch.pwr.wroc.pl
                      Robert Gora  and Pawel Dziekonski

-- 
Paweł Dziekoński, call me Dzieko  | Wroclaw University of Technology
pdziekonski@mml.ch.pwr.wroc.pl    |          Molecular Modelling Lab
http://ozon.ch.pwr.wroc.pl/dzieko |                           POLAND


From chemistry-request@www.ccl.net  Wed Jan 20 07:14:29 1999
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Subject: CCL:Q:Accessible surface of Metal atom
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Hi all,

Suppose you have a transition metal complex. How can one quantify the
'accessible surface' of the metal atom for an incoming ligand? Do there exist
any software packages that yield quantities like that or related to that?

Thank you,

Steven Creve
DSM Research
Geleen
The Netherlands
steven.creve@dsm-group.com



From chemistry-request@www.ccl.net  Wed Jan 20 08:36:47 1999
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From: "lo presti eleonora" <lopresti@modeling.farma.unige.it>
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Date: Wed, 20 Jan 1999 14:35:11 +0100
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Hi CCLers,
could anybody point me to a program which allows to handle the large amounts of
data produced by conformational searches (for example MonteCarlo search), in
particular remove duplicate conformations and cluster the results from
conformation searches?
I'll summarize the responses.
Thanks in advance.

Eleonora

-- 

++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Eleonora Lo Presti
Dip. Scienze Farmaceutiche - Facolta' di Farmacia
Universita' di Genova - Viale Benedetto XV, 3 - 16145 Genova Italy
lopresti@modeling.farma.unige.it
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++



From chemistry-request@www.ccl.net  Wed Jan 20 13:23:31 1999
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From: "Conrad Jones" <cjones92@hotmail.com>
To: CHEMISTRY@www.ccl.net
Subject: Interested in computational chemistry
Date: Wed, 20 Jan 1999 10:22:52 PST
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Hello CCLers,

     My name is Conrad Jones and I'm a graduate student at the Univ. of 
Iowa.  The area I plan in doing my Ph.D work in is computational 
chemistry.  I would like to know the various employment opportunities 
for a Ph.D computational chemist outside of academia such as consulting.  
In addition, I would also like salary information for a comp. chemists 
and what major computer programs must I need to know to be a very 
efficient comp. chemist.  Please respond as soon as possible.  Have a 
nice day.

Conrad

______________________________________________________
Get Your Private, Free Email at http://www.hotmail.com


From chemistry-request@www.ccl.net  Thu Jan 21 10:46:00 1999
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To: danieltedder@yahoo.com

Call for Abstracts
Emerging Technologies in Hazardous Waste Management 
Sponsored by the I&EC Division 
ACS 218th National Meeting
August 22-26, 1999, New Orleans, Louisiana



Papers and presentations are invited that describe emerging technologies
for treating gaseous, liquid or solid hazardous wastes. Contributors may
focus on aspects ranging from fundamental research to demonstration
programs for new technologies. Emerging technologies which may be applied
to a variety of waste streams are particularly encouraged. Specific
applications may include waste treatment for steel and metal manufacturing,
oil refining, coal processing, textile, paint and dye production,  chemical
and pharmaceuticals manufacturing, and nuclear reactor and reprocessing
operations.  Technologies for water purification or the treatment of
leachates from hazardous landfills or contaminated soils are also
appropriate. Emerging technologies for other wastes and review  articles
will be considered. An independent peer review of  all full manuscripts
will be coordinated by the symposium  coordinators and editorial review
board  to meet ACS standards.  One or more books will be published from the
full manuscripts after editing and review.

SEND  SHORT ABSTRACTS  BY MARCH 15, 1999 TO: 

Dr. Dan W. Tedder 
I &EC Symposium Chair
School of Chemical Engineering
Georgia Institute of Technology
Atlanta, GA 30332-0100


Camera-ready abstracts (one paragraph, 150 words or less)  should be
submitted on the standard ACS abstract form or plain white paper. For more
information about abstract preparation go to
http://www.acs.org/meetings/abstract/abinfo.html. For more information
about the location of the symposium go to:
http://www.acs.org/meetings/future/newnewo.htm. For more information about
the I&EC Division, go to: http://membership.acs.org/i/iec/.  Contributors
will be notified of acceptance by May 23, 1999. E-mail  the organizers:
daniel.tedder@che.gatech.edu.
Dan Tedder
School of Chemical Engineering
Georgia Institute of Technology
778 Atlantic Drive
Atlanta, GA 30332-0100 USA

E-Mail: daniel.tedder@che.gatech.edu
Fax:    404-894-2866
Phone: 404-894-2856

From chemistry-request@www.ccl.net  Thu Jan 21 11:07:06 1999
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Date: Thu, 21 Jan 1999 17:13:15 -0800
From: Alessandra Villa <ale@sg2.csrsrc.mi.cnr.it>
To: chemistry@www.ccl.net
Subject: Summary : ab initio NMR calculation (paramegnetic system)
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I thank you all the persons that answer me and try to help me
I summary the answers (4) , maybe it could be halpfull some someone else.
Best Regards 
                      Alessandra

Questions:
> 
> Dear All, 
>        
>         I wonder if someone have performed ab initio NMR
> shielding tensor calculations on paramagnetic compounds by means of GIAO
> or CSGT methods. 
>        Could you point me some paper concerning the argument? or could you
> write me your knowledge about the reliability of GIAO and CSGT NMR
> shielding tensor calculations on paramagnetic molecules? 
>        I will summary all the answers.
>        Thank you 
> 
>  Alessandra  

Answers:

*****************************************************************************
From: "Y. Tantirungrotechai"

You might like to ask Dr. K. Ruud who implement GIAO in Dalton. 
 
I asked to Dr. K. Ruud, follow his answer
From:Kenneth Ruud

 As far as I know from reading about the NMR of
paramagnetic molecules, there are no problem in calculating the
NMR parameters of such compounds. There might be important higher-order
contributions from e.g.spin-orbit coupling. However, these may aso be
calculated with e.g. Dalton.
The main problem is normally that programs cannot easily or accurate treat
open-shell systems. Dalton should be able to do a fair job on these
systems.

*****************************************************************************
From: Georg Schreckenbach

I have read statements like "truly
quantitative calculations of chemical shifts for paramagnetic compounds
have not yet been reported" (B=FChl et al., J. Comp. Chem. 1999, 20, 91) whi=
ch supports this view. 

*****************************************************************************

From: Douglas J. Fox

  Cheeseman, et. al. looked at this when implementing the procedures for
Gaussian94.  J. Chem. Phys. vol 104, pp 5497 (1996).
*****************************************************************************

From:Noah W. Allen, III

You might want to check a review article by A.C. de Dios found in the
"Journal of Progess in NMR Spectroscopy", 82 (1985) 5035.  It's an excellent
source of review for this material.

*******************************************************************************
  Alessandra Villa                            ale@sg2.csrsrc.mi.cnr.it
  PhD-Student 
  Dipartimento di Chimica Fisica ed Elettrochimica
  Universtita' degli Studi di Milano
  via Golgi 19
  20133 Milano-Italy
*******************************************************************************



From chemistry-request@www.ccl.net  Thu Jan 21 12:32:27 1999
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From: Mark Forster <mforster@nibsc.ac.uk>
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To: Steven.Creve@dsm-group.com, chemistry@www.ccl.net
Subject: Re: CCL:CCL:Q:Accessible surface of Metal atom
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Dear Steve

I would like to suggest the program 'NACCESS' by Simon Hubbard,
although designed for protein use it is quite general. I recently tried
it on an iridium complex for example. For commercial
users a (small) fee is charged. See the WWW page

    http://sjh.bi.umist.ac.uk/naccess.html


Steven.Creve@dsm-group.com wrote:

> Hi all,
>
> Suppose you have a transition metal complex. How can one quantify the
> 'accessible surface' of the metal atom for an incoming ligand? Do there exist
> any software packages that yield quantities like that or related to that?
>
> Thank you,
>
> Steven Creve
> DSM Research
> Geleen
> The Netherlands
> steven.creve@dsm-group.com
>
> ---
> Administrivia: This message is automatically appended by the mail exploder:
> CHEMISTRY@www.ccl.net: Everybody | CHEMISTRY-REQUEST@www.ccl.net: Coordinator
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>              Web: http://www.ccl.net/chemistry.html
> ---



--

  Dr Mark J Forster Ph.D.
  Principal Scientist
  Informatics Laboratory
  National Institute for Biological Standards and Control
  Blanche Lane, South Mimms,
  Hertfordshire EN6 3QG, United Kingdom.

  Tel  +44 (0)1707 654753
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From chemistry-request@www.ccl.net  Thu Jan 21 13:34:10 1999
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Hi , 

I am trying to approximate an electronic density from some
molecular orbitals to a linear combination of gaussian function.

This is a procedure to fit the electronic density explained in
some papers, but I do not know how to select the set of gaussian
function to fit the density.

I need to know some information about. 
Would you like to help me ? 

Best regard 
Norge


From chemistry-request@www.ccl.net  Thu Jan 21 13:51:39 1999
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From: Qiang Cui <qiang@tammy.harvard.edu>
To: Alessandra Villa <ale@sg2.csrsrc.mi.cnr.it>
cc: chemistry@www.ccl.net
Subject: Re: CCL:G:Summary : ab initio NMR calculation (paramegnetic system)
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On Thu, 21 Jan 1999, Alessandra Villa wrote:

> 
> I thank you all the persons that answer me and try to help me
> I summary the answers (4) , maybe it could be halpfull some someone else.
> Best Regards 
>                       Alessandra


	Sorry for jumping in at such a late stage, but I would recommand
an excellent review on NMR chemical shift as well as spin-spin coupling
calculations: Chem. Rev. 99, 293-352 (1999). Just from the length, you may
imagine that the paper should cover extensive areas. Just one quote from
the review (for fun:-) "We believe that none of the published reviews are
similar in approach and scope to ours: most concentrate on the results;
those that discuss the theory, do not have the character of a general
review"

	Have fun!



___________________________________________________________________________	
Qiang Cui                   
Dept. of Chem.                   _ __..-;''`--/'/ /.',-`-.
Harvard Univ.                  (`/' ` |  \ \ \\ / / / / .-'/`,_
12 Oxford St.,                /'`\ \   |  \ | \| // // / -.,/_,'-,
Cambridge, MA 02138          /<7' ;  \ \  | ; ||/ /| | \/    |`-/,/-.,_,/')
(617)-495-8997              /  _.-, `,-\,__|  _-| / \ \/|_/  |    '-/.;.\'
(617)-495-1775              `-`  f/ ;      / __/ \__ `/ |__/ |
Fax: (617)-496-3204              `-'      |  -| =|\_  \  |-' |
http://yuri.harvard.edu/~qiang         __/   /_..-' `  ),'  //
                                      ((__.-'((___..-'' \__.'
805 Mt. Auburn Street Apt. 35
Watertown, MA 02472
(617)-926-6027
__________________________________________________________________________
	


From chemistry-request@www.ccl.net  Thu Jan 21 14:03:42 1999
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Date: 21 Jan 1999 14:04:36 -0500
From: "Boyd" <boyd@chem.iupui.edu>
Subject: Journal of Molecular Graphics and Modelling
To: "OSC CCL" <chemistry@www.ccl.net>
X-Mailer: Mail*Link SMTP for Quarterdeck Mail; Version 4.1.0


Dear CCLers,
	A major change in the Journal of Molecular Graphics and 
Modelling (JMGM) will be of interest to computational chemists.

	For years JMGM has been associated with the Molecular 
Graphics and Modelling Society and has had a somewhat 
narrow focus.  Now, however, the journal is officially 
co-associated with the Computers in Chemistry (COMP) division 
of the American Chemical Society.  The 2200 members of COMP 
have a wide range of interests in computational chemistry. 
COMP members are eligible for a special subscription rate.

	A new editorial direction has been set, and a new 
international editorial board has been appointed.  JMGM offers 
advantages of free color figures, quick publication time, and 
both hard copy and online versions.

	The scope of the new JMGM encompasses:
o	molecular interactions
o	protein and polymer engineering
o	pharmaceutical design
o	materials design
o	applied theoretical chemistry
o	structure-property relationships
o	computer library design

	High quality papers describing work at the cutting edge of 
science are welcome.  Instructions to authors are given at 
http://www.elsevier.nl/locate/jmgm/

Thank you, Don

Donald B. Boyd, Ph.D.
Editor, Journal of Molecular Graphics and Modelling
Department of Chemistry
Indiana University-Purdue University at Indianapolis
402 North Blackford Street
Indianapolis, Indiana 46202-3274, U.S.A.
Telephone 317-274-6891, FAX 317-274-4701
E-mail boyd@chem.iupui.edu

From chemistry-request@www.ccl.net  Thu Jan 21 14:55:48 1999
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Date: Thu, 21 Jan 1999 17:08:07 +36000
From: Richard Wood <dmpc@hugh.chem.uic.edu>
cc: chemistry@www.ccl.net
Subject: Re: CCL:CCL:Q:Accessible surface of Metal atom
In-Reply-To: <36A7649C.E832A309@nibsc.ac.uk>
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Is there a program like this that will run under Windows 95/98?

Richard


On Thu, 21 Jan 1999, Mark Forster wrote:

> Dear Steve
> 
> I would like to suggest the program 'NACCESS' by Simon Hubbard,
> although designed for protein use it is quite general. I recently tried
> it on an iridium complex for example. For commercial
> users a (small) fee is charged. See the WWW page
> 
>     http://sjh.bi.umist.ac.uk/naccess.html
> 
> 
> Steven.Creve@dsm-group.com wrote:
> 
> > Hi all,
> >
> > Suppose you have a transition metal complex. How can one quantify the
> > 'accessible surface' of the metal atom for an incoming ligand? Do there exist
> > any software packages that yield quantities like that or related to that?
> >
> > Thank you,
> >
> > Steven Creve
> > DSM Research
> > Geleen
> > The Netherlands
> > steven.creve@dsm-group.com
> >
> > ---
> > Administrivia: This message is automatically appended by the mail exploder:
> > CHEMISTRY@www.ccl.net: Everybody | CHEMISTRY-REQUEST@www.ccl.net: Coordinator
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> --
> 
>   Dr Mark J Forster Ph.D.
>   Principal Scientist
>   Informatics Laboratory
>   National Institute for Biological Standards and Control
>   Blanche Lane, South Mimms,
>   Hertfordshire EN6 3QG, United Kingdom.
> 
>   Tel  +44 (0)1707 654753
>   FAX  +44 (0)1707 646730
>   E-mail  mforster@nibsc.ac.uk
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