Subject: residue change in AMBER

From: Vemparala Satyavani <[email-masked]>
Date: Wed, 22 Aug 2001 23:18:46 -0500 (CDT)

Hi,

Is there a way to change a residue in a protein and then do energy 
minimisations and run MD on the new structure in AMBER?..(with our 
knowing apriori the positions of the new residue).. i.e., if a protein 
has a sequence : GLN PRO ASN TRP ASN..and i want to see what happens if i 
change TRP to say GLN.. can i do that in AMBER?

Thanks
vani