Subject: Re: CCL:Tool for secondary structure prediction

From: andre mauricio de oliveira <amolive.-at-.dedalus.lcc.ufmg.br>
Date: Thu, 7 Aug 2003 10:50:24 -0300 (BSC)

Dear Dr. Steinbrecher,

(1) Try www.expasy.org.
(2) VEGA (freeware!) also has an interface w/ PREDICTOR	 suite.

Both require sequence in FASTA format.

Greets.

On Thu, 7 Aug 2003, Thomas Steinbrecher wrote:

> Dear CCLers,
>
> I am looking for a tool to predict secondary structure
> elements for a protein of known sequence but without
> 3D-structure. There are no homologues with known structure.
>
> Please point me to references for a program (ideally open
> source/freeware) that can do such a thing.
>
> Kind Regards,
>
> Thomas Steinbrecher
>
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Andre Mauricio de Oliveira

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