From chemistry-request@ccl.net Thu Sep 16 09:15:28 2004
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Reply-To: workshops:at:accelrys.com
To: CHEMISTRY:at:ccl.net
Subject: CCL:  Accelrys Customer Training in November
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From: Jeff Nauss <jnauss:at:accelrys.com>
Date: Wed, 15 Sep 2004 08:05:42 -0700
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Accelrys Inc. are holding the following training workshops at locations in 
Europe during November. 
These events are designed to help you get more value from your Accelrys 
software, helping you to better accomplish your research goals.

Costs are US$600 per day for commercial, US$450 per day for government and 
US$330 per day for academic.

MACROMOLECULAR MODELING

Introduction to InsightII for Life Sciences  9 November      Cambridge, UK
Homology-Based Protein Design                11-12 November  Cambridge, UK
Structure Based Drug Design with InsightII   15-16 November  Cambridge, UK
CHARMm                                       17-18 November  Cambridge, UK
Modeling of GPCR Proteins with InsightII     19 November     Cambridge, UK


For course details and registration see: 
http://www.accelrys.com/training/macro/schedule.html

MATERIALS SCIENCE MODELING AND SIMULATIONS

Introduction to Materials Studio            2 November    Cambridge, UK
Introduction to Polymer Modeling            3-4 November  Cambridge, UK
Introduction to QSAR in Materials Science   5 November    Cambridge, UK
Introduction to Quantum Mechanics Modeling  8-9 November  Cambridge, UK
Modeling of Nanomaterials                   17 November   Imperial 
College, London, UK

For course details and registration see: 
http://www.accelrys.com/training/matsci/schedule.html

--
Jeffrey L. Nauss, Ph.D.
Lead Training Scientist

Accelrys
9685 Scranton Road
San Diego, CA 92121-1761

Phone: 858-799-5555
Fax: 858-799-5100
E-mail: jnauss:at:accelrys.com
http://www.accelrys.com/training



From chemistry-request@ccl.net Thu Sep 16 09:33:56 2004
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From: "Ahmed" <ahmed.bouferguene)at(ualberta.ca>
To: <chemistry)at(ccl.net>
Subject: Compiling G03 under Win-XP
Date: Wed, 15 Sep 2004 18:30:23 -0600
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Greetings all,

 

Does anybody has any experience in building G-03 under Win-XP ?

 

I have a source (supposed to be compilable under Unix/Linux) but I am
wondering whether anyone tried to build such a source under Windows ? 

 

Cheers,

 

Ahmed


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<p class=3DMsoNormal><font size=3D2 face=3DArial><span =
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font-family:Arial'>Greetings all,<o:p></o:p></span></font></p>

<p class=3DMsoNormal><font size=3D2 face=3DArial><span =
style=3D'font-size:10.0pt;
font-family:Arial'><o:p>&nbsp;</o:p></span></font></p>

<p class=3DMsoNormal><font size=3D2 face=3DArial><span =
style=3D'font-size:10.0pt;
font-family:Arial'>Does anybody has any experience in building G-03 =
under
Win-XP ?<o:p></o:p></span></font></p>

<p class=3DMsoNormal><font size=3D2 face=3DArial><span =
style=3D'font-size:10.0pt;
font-family:Arial'><o:p>&nbsp;</o:p></span></font></p>

<p class=3DMsoNormal><font size=3D2 face=3DArial><span =
style=3D'font-size:10.0pt;
font-family:Arial'>I have a source (supposed to be compilable under =
Unix/Linux)
but I am wondering whether anyone tried to build such a source under =
Windows ? <o:p></o:p></span></font></p>

<p class=3DMsoNormal><font size=3D2 face=3DArial><span =
style=3D'font-size:10.0pt;
font-family:Arial'><o:p>&nbsp;</o:p></span></font></p>

<p class=3DMsoNormal><font size=3D2 face=3DArial><span =
style=3D'font-size:10.0pt;
font-family:Arial'>Cheers,<o:p></o:p></span></font></p>

<p class=3DMsoNormal><font size=3D2 face=3DArial><span =
style=3D'font-size:10.0pt;
font-family:Arial'><o:p>&nbsp;</o:p></span></font></p>

<p class=3DMsoNormal><font size=3D2 face=3DArial><span =
style=3D'font-size:10.0pt;
font-family:Arial'>Ahmed<o:p></o:p></span></font></p>

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From chemistry-request@ccl.net Thu Sep 16 09:35:16 2004
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Date: Wed, 15 Sep 2004 16:29:24 +0200
To: chemistry)at(ccl.net
From: Patrick Bultinck <Patrick.Bultinck)at(UGent.be>
Subject: higher order density matrices
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Dear all,

Could somebody point me to good algorithms on how to obtain higher order 
density matrices from non single-Slater determinant methods like CI, CC, 
... where the Lowdin determinant method is no longer applicable.

I am mainly looking for second order and third order density matrices.

Thanks !

Patrick Bultinck
Ghent University
Belgium



From chemistry-request@ccl.net Thu Sep 16 10:46:44 2004
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	for chemistry:at:ccl.net; Thu, 16 Sep 2004 08:56:45 -0700
From: "Hugo Villar" <hugo:at:altoris.com>
To: <chemistry:at:ccl.net>
Subject: SARvision
Date: Thu, 16 Sep 2004 08:56:36 -0700
Message-ID: <HOEJJPAAGHFLHGLOPDBAKEANCCAA.hugo:at:altoris.com>
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We are developing software that is useful to medicinal and computational
chemists who may have SAR data to analyze.



SARvision is a simple desktop application for chemistry:



* Identifies scaffolds (complete substructures) prevalent in your dataset,
up to 10,000 molecules.

* For presentations, it builds Molecular Lists and R-group tables with
little or no effort. You do not have to spend time orienting molecules in
the same way the program does it for you.

* Allows you to correlate the scaffolds with other numerical data
(biological, physicochemical) you might have.



SARvision identifies relevant chemical motifs, and organizes available data
(physicochemical, biological and biochemical data) according to those
prevalent substructures, organized from very simple to highly complex.   The
user can then quickly select subsets of structures and create export the
data into applications such as Microsoft Word, as R-group tables or
Molecular lists with molecules oriented in a consistent way.

There is more information and a demo version of the software at:

http://www.chemapps.com/products.html

 If you prefer, I will be glad to forward you a CD with the program, just
let me know. Please let me know if you would like to see additional
information. The program is priced very attractively and runs with a
perpetual license. Feel free to redirect this e-mail to anybody in your
group that may take advantage of the software.

Thanks !



Hugo O. Villar, Ph.D.
Altoris, Inc.
5820 Miramar Rd- Suite 207
San Diego, CA 92121
(858) 361-5495 - cell
(858) 453-9509 - main line
(858) 453-9510 - fax line


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	charset="iso-8859-1"
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN">
<HTML><HEAD>
<META http-equiv=3DContent-Type content=3D"text/html; =
charset=3Diso-8859-1">
<META content=3D"MSHTML 6.00.2743.600" name=3DGENERATOR></HEAD>
<BODY>
<DIV><FONT face=3DVerdana size=3D2>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt; TEXT-ALIGN: =
justify"><SPAN=20
style=3D"FONT-SIZE: 10pt; FONT-FAMILY: Arial">We are developing software =
that is=20
useful to medicinal and computational chemists who may have SAR data to =
analyze.=20
<?xml:namespace prefix =3D o ns =3D =
"urn:schemas-microsoft-com:office:office"=20
/><o:p></o:p></SPAN></P>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt; TEXT-ALIGN: =
justify"><SPAN=20
style=3D"FONT-SIZE: 10pt; FONT-FAMILY: =
Arial">&nbsp;<o:p></o:p></SPAN></P>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt; TEXT-ALIGN: =
justify"><SPAN=20
style=3D"FONT-SIZE: 10pt; FONT-FAMILY: Arial">SARvision <SPAN=20
style=3D"COLOR: black">is a simple desktop application for chemistry:=20
<o:p></o:p></SPAN></SPAN></P>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt; TEXT-ALIGN: =
justify"><SPAN=20
style=3D"FONT-SIZE: 10pt; COLOR: black; FONT-FAMILY: =
Arial">&nbsp;<o:p></o:p></SPAN></P>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt; TEXT-ALIGN: =
justify"><SPAN=20
style=3D"FONT-SIZE: 10pt; COLOR: black; FONT-FAMILY: Arial">* Identifies =

scaffolds&nbsp;<SPAN class=3D186274715-16092004>(complete substructures) =

</SPAN>prevalent in your dataset, up to 10,000 molecules. =
<o:p></o:p></SPAN></P>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt; TEXT-ALIGN: =
justify"><SPAN=20
style=3D"FONT-SIZE: 10pt; COLOR: black; FONT-FAMILY: Arial">* For =
presentations,=20
it builds Molecular Lists and R-group tables with little or no effort. =
You do=20
not have to spend time orienting molecules in the same way the program =
does it=20
for you.<o:p></o:p></SPAN></P>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt; TEXT-ALIGN: =
justify"><SPAN=20
style=3D"FONT-SIZE: 10pt; COLOR: black; FONT-FAMILY: Arial">* Allows you =
to=20
correlate the scaffolds with other numerical data&nbsp;<SPAN=20
class=3D186274715-16092004>(biological, physicochemical) </SPAN>you =
might=20
have.<o:p></o:p></SPAN></P>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt; TEXT-ALIGN: =
justify"><SPAN=20
style=3D"FONT-SIZE: 10pt; COLOR: black; FONT-FAMILY: =
Arial">&nbsp;<o:p></o:p></SPAN></P>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt; TEXT-ALIGN: =
justify"><SPAN=20
style=3D"FONT-SIZE: 10pt; COLOR: black; FONT-FAMILY: Arial">SARvision =
identif<SPAN=20
class=3D186274715-16092004>ies</SPAN> relevant chemical motifs, =
and&nbsp;<SPAN=20
class=3D186274715-16092004>organizes </SPAN>available&nbsp;<SPAN=20
class=3D186274715-16092004>data (</SPAN>physicochemical, biological and=20
biochemical data<SPAN class=3D186274715-16092004>) according to those =
prevalent=20
substructures, organized from very simple to highly complex</SPAN>.<SPAN =

style=3D"mso-spacerun: yes">&nbsp;&nbsp;</SPAN> The user can then=20
quickly&nbsp;<SPAN class=3D186274715-16092004>select subsets of =
structures and=20
</SPAN>create export<SPAN class=3D186274715-16092004> the =
data</SPAN>&nbsp;into=20
applications such as Microsoft Word<SPAN =
class=3D186274715-16092004>,</SPAN><SPAN=20
class=3D186274715-16092004> as R-group tables or Molecular lists with =
molecules=20
oriented in a consistent way.</SPAN>&nbsp;<o:p></o:p></SPAN></P>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt; TEXT-ALIGN: =
justify"><SPAN=20
style=3D"FONT-SIZE: 10pt; COLOR: black; FONT-FAMILY: Arial">There is =
more=20
information and a demo version of the software at: </SPAN><SPAN=20
style=3D"COLOR: black; FONT-FAMILY: Arial"><o:p></o:p></SPAN></P>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt"><SPAN=20
style=3D"COLOR: black; FONT-FAMILY: Arial"><A=20
href=3D"http://www.chemapps.com/products.html"><SPAN=20
style=3D"FONT-SIZE: 10pt; COLOR: =
black">http://www.chemapps.com/products.html</SPAN></A></SPAN><SPAN=20
style=3D"FONT-SIZE: 10pt; COLOR: black; FONT-FAMILY: Arial"> =
</SPAN><SPAN=20
style=3D"COLOR: black; FONT-FAMILY: Arial"><o:p></o:p></SPAN></P>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt"><SPAN=20
style=3D"COLOR: black; FONT-FAMILY: Arial"><FONT =
size=3D3>&nbsp;</FONT></SPAN><SPAN=20
style=3D"FONT-SIZE: 10pt; COLOR: black; FONT-FAMILY: Arial">If you =
prefer, I will=20
be glad to forward you a CD with the program, just let me know. Please =
let me=20
know if you would like to see additional information. The program is =
priced very=20
attractively and runs with a perpetual license. Feel free to redirect =
this=20
e-mail to anybody in your group that may take advantage of the software. =

<o:p></o:p></SPAN></P>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt"><SPAN=20
style=3D"FONT-SIZE: 10pt; COLOR: black; FONT-FAMILY: Arial"><SPAN=20
class=3D186274715-16092004><FONT face=3DVerdana>Thanks =
!</FONT></SPAN></SPAN></P>
<P class=3DMsoNormal style=3D"MARGIN: 0in 0in 0pt"><SPAN=20
style=3D"FONT-SIZE: 10pt; COLOR: black; FONT-FAMILY: =
Arial"><o:p></o:p></SPAN>&nbsp;</P></FONT></DIV>
<DIV><FONT face=3DArial color=3D#808080 size=3D2>Hugo O. Villar, =
Ph.D.</FONT></DIV>
<DIV><FONT face=3DArial color=3D#808080 size=3D2><STRONG>Altoris,=20
Inc.</STRONG></FONT></DIV>
<DIV><FONT face=3DArial color=3D#808080 size=3D2>5820 Miramar Rd- Suite=20
207</FONT></DIV>
<DIV><FONT face=3DArial color=3D#808080 size=3D2>San Diego, CA =
92121</FONT></DIV>
<DIV><FONT face=3DArial color=3D#808080 size=3D2>(858) 361-5495 - =
cell</FONT></DIV>
<DIV><FONT face=3DArial color=3D#808080 size=3D2>(858) 453-9509 - main=20
line</FONT></DIV>
<DIV><FONT face=3DArial color=3D#808080 size=3D2>(858) 453-9510 - fax=20
line</FONT></DIV>
<DIV><FONT face=3DArial color=3D#808080 size=3D2></FONT>&nbsp;</DIV>
<DIV>
<DIV>
<DIV><SPAN class=3D061043216-16062004><FONT face=3DVerdana=20
size=3D2></FONT></SPAN></DIV></DIV></DIV></BODY></HTML>

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From chemistry-request@ccl.net Thu Sep 16 11:07:33 2004
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Date: Thu, 16 Sep 2004 17:51:18 +0200
From: Oriol Pineda <opineda/at/qo.ub.es>
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To: Ahmed <ahmed.bouferguene/at/ualberta.ca>
Cc: chemistry/at/ccl.net
Subject: Re:Compiling G03 under Win-XP
References: <200409160024.i8G0OiRj013619/at/pilsener.srv.ualberta.ca>
In-Reply-To: <200409160024.i8G0OiRj013619/at/pilsener.srv.ualberta.ca>
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There is a native version of G03 for Windows, which you have to
purchase separately.<br>
<br>
Alternatively, perhaps you can use cygwin to compile it.<br>
<br>
Luck!!!<br>
<br>
Ahmed wrote:<br>
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  <div class="Section1">
  <p class="MsoNormal"><font size="2" face="Arial"><span
 style="font-size: 10pt; font-family: Arial;">Greetings all,<o:p></o:p></span></font></p>
  <p class="MsoNormal"><font size="2" face="Arial"><span
 style="font-size: 10pt; font-family: Arial;"><o:p>&nbsp;</o:p></span></font></p>
  <p class="MsoNormal"><font size="2" face="Arial"><span
 style="font-size: 10pt; font-family: Arial;">Does anybody has any
experience in building G-03 under
Win-XP ?<o:p></o:p></span></font></p>
  <p class="MsoNormal"><font size="2" face="Arial"><span
 style="font-size: 10pt; font-family: Arial;"><o:p>&nbsp;</o:p></span></font></p>
  <p class="MsoNormal"><font size="2" face="Arial"><span
 style="font-size: 10pt; font-family: Arial;">I have a source (supposed
to be compilable under Unix/Linux)
but I am wondering whether anyone tried to build such a source under
Windows ? <o:p></o:p></span></font></p>
  <p class="MsoNormal"><font size="2" face="Arial"><span
 style="font-size: 10pt; font-family: Arial;"><o:p>&nbsp;</o:p></span></font></p>
  <p class="MsoNormal"><font size="2" face="Arial"><span
 style="font-size: 10pt; font-family: Arial;">Cheers,<o:p></o:p></span></font></p>
  <p class="MsoNormal"><font size="2" face="Arial"><span
 style="font-size: 10pt; font-family: Arial;"><o:p>&nbsp;</o:p></span></font></p>
  <p class="MsoNormal"><font size="2" face="Arial"><span
 style="font-size: 10pt; font-family: Arial;">Ahmed<o:p></o:p></span></font></p>
  </div>
</blockquote>
</body>
</html>



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From: "A. Boufarik" <aboufer2000!at!yahoo.ca>
Subject: Gaussian
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Hi all,
 
I am trying to get started on G-03 and wondering whether anyone can spare a data file (for H2 or H2O) for instance that I can try out ?
 
 
Thanks all,
 
Al



---------------------------------
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<DIV>Hi all,</DIV>
<DIV>&nbsp;</DIV>
<DIV>I am trying to get started on G-03 and wondering whether anyone can spare a data file (for H2 or H2O) for instance that I can try out ?</DIV>
<DIV>&nbsp;</DIV>
<DIV>&nbsp;</DIV>
<DIV>Thanks all,</DIV>
<DIV>&nbsp;</DIV>
<DIV>Al</DIV><p><br><hr size=1>Post your free ad now! <a href="http://ca.personals.yahoo.com/"><b>Yahoo! Canada Personals</b></a><br>
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