Subject: CCL: question about AMBER atom definition

From: khunter.-at-.mta.ca
Date: Wed, 29 Sep 2004 15:43:30 -0300

Our research group has been having some difficulties with atom definitions for 
AMBER files generated from GaussView 3.09.  For example C8 in purines should 
be a CK atom type but GaussView is defining it as CM.  There must be a program 
that defines it properly based on the usage of AMBER, or do most assign atom 
types manually?

Any assistance would be appreciated.

Ken Hunter
Mount Allison University