From chemistry-request@ccl.net Sat Oct 2 13:27:39 2004 Received: from spearnet.net (mail.spearnet.net [65.219.158.32]) by server.ccl.net (8.12.8/8.12.8) with ESMTP id i92IRZMh023125; Sat, 2 Oct 2004 13:27:35 -0500 Received: from [216.8.44.165] [216.8.44.165] by spearnet.net with ESMTP (SMTPD32-8.13) id A5BE5D3D00F0; Sat, 02 Oct 2004 13:38:54 -0500 In-Reply-To: References: Mime-Version: 1.0 (Apple Message framework v619) Content-Type: text/plain; charset=US-ASCII; delsp=yes; format=flowed Message-Id: <32020FBB-14A2-11D9-A013-003065963E2C!at!cornell.edu> Content-Transfer-Encoding: 7bit Cc: Computational Chemistry List , chemistry!at!ccl.net, andras.borosy!at!givaudan.com From: richard Subject: Re: CCL:Glasses for printed stereo imagaes Date: Sat, 2 Oct 2004 14:38:04 -0400 To: Szilveszter JUHOS X-Mailer: Apple Mail (2.619) X-Spam-Status: No, hits=-0.5 required=7.5 tests=SMILEY,T_NUM_IN_DOMAIN_3 autolearn=no version=2.61 X-Spam-Checker-Version: SpamAssassin 2.61 (1.212.2.1-2003-12-09-exp) on servernd.ccl.net Reel3D was a mail order company that sold every kind of low-cost stereo product. They recently closed, but they have left their web site open and it contains many pointers to other companies that may sell the product you are looking for: http://www.stereoscopy.com/reel3d/ Richard Gillilan MacCHESS, Wilson lab Cornell University On Oct 2, 2004, at 10:51 AM, Szilveszter JUHOS wrote: > > > On Fri, 1 Oct 2004 andras.borosy!at!givaudan.com wrote: >> Do you happen to know where one can buy special glasses for printed >> stereo images? > > Szia Andris, > > I do not know about lenses, my optician told it is actually good for > your > eyes if you learn how to see stereo pictures (crossed or parallel > eyes). I > admit I had to struggle a bit but learned with the help of this site: > > http://www.vision3d.com/stereo.html > > Still, it can be confusing when you are watching a "parallel" picture > crossed eyes or vica versa. For parallel view there is is a trick for a > beginner: put a sheet of paper perpendicular to the picture to separate > the two viewfields. The most difficult part is to focus and keep your > eyes > parallel or crossed (At the beginning it is good to keep a coffe/brandy > close by against nausea ;) . > Hope it helps: > > Szilva > > > > -= This is automatically added to each message by the mailing script =- > To send e-mail to subscribers of CCL put the string CCL: on your > Subject: line > and send your message to: CHEMISTRY!at!ccl.net > > Send your subscription/unsubscription requests to: > CHEMISTRY-REQUEST!at!ccl.net > HOME Page: http://www.ccl.net | Jobs Page: http://www.ccl.net/jobs > > If your mail is bouncing from CCL.NET domain send it to the maintainer: > Jan Labanowski, jlabanow!at!nd.edu (read about it on CCL Home Page) > -+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+- > +-+ > > > > > From chemistry-request@ccl.net Sat Oct 2 14:06:00 2004 Received: from mxv2.wvu.edu (mxv2.wvu.edu [157.182.140.123]) by server.ccl.net (8.12.8/8.12.8) with ESMTP id i92J5xMh024754 for ; Sat, 2 Oct 2004 14:05:59 -0500 Received: from GWIA.HSC.WVU.EDU (gateway.hsc.wvu.edu [157.182.102.90]) by mxv2.wvu.edu (8.12.10/8.12.10) with ESMTP id i92JGxs4003211 for ; Sat, 2 Oct 2004 15:17:03 -0400 (EDT) (envelope-from pgannett[at]hsc.wvu.edu) Received: from HSC-DOM5-MTA by GWIA.HSC.WVU.EDU with Novell_GroupWise; Sat, 02 Oct 2004 15:18:02 -0400 Message-Id: X-Mailer: Novell GroupWise Internet Agent 6.5.2 Beta Date: Sat, 02 Oct 2004 12:10:55 -0400 From: "Peter Gannett" To: , , Subject: Re: CCL:Glasses for printed stereo imagaes Mime-Version: 1.0 Content-Type: text/plain; charset=US-ASCII Content-Transfer-Encoding: 7bit Content-Disposition: inline X-Spam-Status: No, hits=1.7 required=7.5 tests=ALUSSINAN_5,DATE_IN_PAST_03_06 autolearn=no version=2.61 X-Spam-Checker-Version: SpamAssassin 2.61 (1.212.2.1-2003-12-09-exp) on servernd.ccl.net We use CrystalEyes. They are ridiculously expensive but they also work well. http://www.stereographics.com/products/crystaleyes/body_crystaleyes.html Pete Gannett >>> Eric Bennett 10/1/2004 1:38:41 PM >>> andras.borosy[at]givaudan.com wrote: >Dear Colleagues, > >Do you happen to know where one can buy special glasses for printed >stereo images? > >Many thank, > > Here is one source: http://www.hamptonresearch.com/hrproducts/4517.html -- Eric Bennett, Center for Drug Design, U of Minnesota -= This is automatically added to each message by the mailing script =- To send e-mail to subscribers of CCL put the string CCL: on your Subject: line and send your message to: CHEMISTRY[at]ccl.net Send your subscription/unsubscription requests to: CHEMISTRY-REQUEST[at]ccl.net HOME Page: http://www.ccl.net | Jobs Page: http://www.ccl.net/jobs If your mail is bouncing from CCL.NET domain send it to the maintainer: Jan Labanowski, jlabanow[at]nd.edu (read about it on CCL Home Page) -+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+ From chemistry-request@ccl.net Sun Oct 3 09:53:26 2004 Received: from mail.ic.sunysb.edu (mail.ic.sunysb.edu [129.49.1.4]) by server.ccl.net (8.12.8/8.12.8) with ESMTP id i93ErPU6004283 for ; Sun, 3 Oct 2004 09:53:25 -0500 Received: from postal.ic.sunysb.edu (mail [129.49.1.4]) by mail.ic.sunysb.edu (8.13.1/8.13.1) with SMTP id i93F4HI7022455; Sun, 3 Oct 2004 11:04:34 -0400 (EDT) Received: from smtp.ic.sunysb.edu ([129.49.1.24]) by postal.ic.sunysb.edu (SMSSMTP 4.0.0.59) with SMTP id M2004100311043321670 ; Sun, 03 Oct 2004 11:04:33 -0400 Received: from sparky.ic.sunysb.edu (daemon~at~sparky.ic.sunysb.edu [129.49.1.3]) by smtp.ic.sunysb.edu (8.13.1/8.13.1) with ESMTP id i93F4XA5022544; Sun, 3 Oct 2004 11:04:33 -0400 (EDT) Received: from localhost (yonyang@localhost) by sparky.ic.sunysb.edu (8.12.10/8.12.9) with ESMTP id i93F4TmJ014880; Sun, 3 Oct 2004 11:04:33 -0400 (EDT) Date: Sun, 3 Oct 2004 11:04:29 -0400 (EDT) From: Yong Liang Yang To: chemistry~at~ccl.net cc: yonyang~at~ic.sunysb.edu Subject: Nativeness RMSD Message-ID: MIME-Version: 1.0 Content-Type: TEXT/PLAIN; charset=US-ASCII; format=flowed X-Spam-Status: No, hits=3.0 required=7.5 tests=NO_RDNS2 autolearn=no version=2.61 X-Spam-Checker-Version: SpamAssassin 2.61 (1.212.2.1-2003-12-09-exp) on servernd.ccl.net Dear Colleagues: I would like to calculate the nativeness RMSD of docked structures from a small molecules database with the native ligand (reference structure) from crystal structure. In another word, I want to calculate RMSD of two different structures without translating or changing the orientation of second structure. However, most RMSD algorithms try to translate the orientation of second structure and minimize the distance. Could someone recommend some packages or codes which could calculate nativeness RMSD? Many thanks and appreciate it. (I have posted this topic on Autodock list) Warm regards Yong Stony Brook