From owner-chemistry@ccl.net Wed Nov 2 16:44:00 2016 From: "Juan Torras joan.torras]~[upc.edu" To: CCL Subject: CCL:G: Software announcement: Release of PUPIL v3.1 Message-Id: <-52472-161102164033-10595-NqlLObDbIs3EQwL/8R3y5Q * server.ccl.net> X-Original-From: "Juan Torras" Date: Wed, 2 Nov 2016 16:40:31 -0400 Sent to CCL by: "Juan Torras" [joan.torras|a|upc.edu] We are pleased to announce the release of PUPIL 3.1. PUPIL (Program for User Package Interface and Linking), is a software environment that allows users and developers to link quickly and efficiently together multiple software packages in a fully automated multi-scale simulation under the QM/MM-MD approach. - Graphic User Interface to build the main simulation inputfile. - Simulation Manager to lead the multi-scale simulation between different Calculation Units. - Long-range electrostatics based in Ewald-summations. - Multiple active zone QM/MM-MD (maz-QM/MM-MD approach) - Interface with Amber v10 up to v16 - Interface with DL_CLASS v1.9 (DL_POLY) - Interface with Gaussian03 and 09 - Interface with deMon2k v4.3.8 - Interface with NWChem v6.1.1, and v6.3 up to v6.6 - Interface with Siesta v4.0 (Start/Stop and CycleQM behaviors) - Interface with mndo97 - Interface with MOPAC2016 - Interface with ORCA 3.0.3 - stubMD. Stub program for interface sample and testing playing a Molecular Dynamics Calculation Unit role. - stubQM. Stub program for interface sample and testing, playing a Cycle Quantum Mechanics Calculation Unit role. - stubDI. Stub program for interface sample and testing,playing an external Domain Identifier Calculation Unit role. Generation of multiple QM regions for testing. New Features: - Multiple active zone QM/MM-MD implementation (maz-QM/MM-MD approach). - Runtime load-balancing manager among different QM regions in maz-QM/MM-MD approach. - New PUPIL-MOPAC interface. - New PUPIL-ORCA interface. For full details of PUPIL's features and capabilities, visit our web page: http://pupil.sourceforge.net/ The PUPIL Team.