From owner-chemistry@ccl.net Wed Nov 30 12:31:00 2022
From: "Elaine Meng meng-#-cgl.ucsf.edu" <owner-chemistry^server.ccl.net>
To: CCL
Subject: CCL: ChimeraX 1.5 release
Message-Id: <-54826-221130112411-8379-0bJ1kYxP+TpRkE1Pru4Mow^server.ccl.net>
X-Original-From: "Elaine  Meng" <meng~~cgl.ucsf.edu>
Date: Wed, 30 Nov 2022 11:24:08 -0500


Sent to CCL by: "Elaine  Meng" [meng-,-cgl.ucsf.edu]
UCSF ChimeraX version 1.5 has been released!

ChimeraX includes user documentation and is free for noncommercial use.
Download for Windows, Linux, and MacOS from:
https://www.rbvi.ucsf.edu/chimerax/

Updates since version 1.4 (Jun 2022) include:

- AlphaFold search/fetch uses database v4 (fixes ~4% of v3 entries)
- show AlphaFold residue-residue errors (PAE) with colored lines
- Axes/Planes/Centroids tool to define objects, use in measurements
- transform surface models (scale, shift, rotate)
- add hydrogens GUI
- calculate and assign charges, including for nonstandard residues
- dock prep command
- renumber residues, change chain IDs
- crosseye and walleye stereo
- cleaner close session (reverts more settings)
- UniProt sequence fetch updated to work with UniProtKB's new API
- DICOM browser shows patient-study-series hierarchy in medical image data

For details, please see the ChimeraX change log:
https://www.rbvi.ucsf.edu/trac/ChimeraX/wiki/ChangeLog