>From unipune.ernet.in!gadre@iucaa.ernet.in Sat May 11 09:07 EDT 1996
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Date: Sat, 11 May 1996 12:28:10 +0500
From: gadre@unipune.ernet.in (Faculty)
Message-Id: <9605111728.AA05282@unipune.ernet.in>
To: CHEMISTRY@www.ccl.net
Subject: Weak complexes of cyclopropane and benzene.
Cc: gadre@unipune.ernet.in
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Dear Sirs :
	We are currently working on the modelling of cyclopropane
and benzene complexes with HF, HCl, HCN, H2O, NH3, CH3OH, H2S.  
We are interested in knowing the interaction energies and the 
intermolecular geometrical parameters.
Are there any experimental or theoretical references for these systems?
We will appreciate receiving these references.
Thank You.
Shridhar Gadre (e-mail : gadre@parcom.ernet.in ; gadre@unipune.ernet.in)
May 11, 1996.


>From shj@sbc2.kist.re.kr Sat May 11 03:15 EDT 1996
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Date: Sat, 11 May 1996 16:15:09 -0800
From: shj@sbc2.kist.re.kr (sun-hee jung)
Message-Id: <199605120015.QAA21070@sbc2.kist.re.kr>
To: chemistry@www.ccl.net
Subject: 5 coordinated Fe(II, or III) ion study
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  Hi, Dear Netters ! 

  I'd like to know whether there has been quantum mechanical study of 
  Fe ion (either 2+ or 3+ charged) with 5 coordination chemistry, 
  with like histidine, or aspartate amino acid type of ligand. 
  I'd like to know especially, partial charges, and geometry of 
  Fe ion in the 5 liganded state. 

  Any reference and/or quote of your past and current study will be 
  appreciated. 

  Thank you very much for your help !!!


>From irikura@ENH.NIST.GOV Mon May 13 09:54 EDT 1996
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Date: Mon, 13 May 1996 09:50:41 -0400
From: Karl Irikura <irikura@ENH.NIST.GOV>
Subject: Re: CCL:Free Energy of Aluminium Hydroxide species
X-Sender: irikura@enh.nist.gov
To: chemistry@www.ccl.net
Cc: dfrurip@dow.com
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>    The reply was basically that I thought such data was available in
>standard compilations like the JANAF tables, Gurvich tables, etc.
>
>
>    As a related point, I'm "theoretical chemist/physicist" who is _not_ a
>quantum chemist (stat mech actually), I'd like to ask/challenge the group
>with a question:
>
>    Why not use Group Contribution Methods for such calculations?  Surely
>their accuracy is as good as or better than the current state of the art for
>the QM approach.  If I'm wrong, pls enlighten me.
>

>
>W. R. Smith                        Professor
>
>

There will be a symposium on just this topic at the 212th American Chemical
Society National Meeting in Orlando, Florida (Aug. 25-29, 1996).  It will
include the usual technical talks by leading scientists and engineers and
also a two-hour Panel Discussion about the industrial needs for
thermochemical data.  Flyer below:



                  -- Symposium announcement -- 
                                
                  COMPUTATIONAL THERMOCHEMISTRY

American Chemical Society	COMP Division
212th National Meeting		Orlando, Florida
                		August 25-29, 1996

 ...including any computer-based means for predicting the thermochemical
properties of a substance. This encompasses everything from group methods
to high-level ab initio calculations.  Potential topic areas include:

          * Advances in Group Contribution Techniques
          * New Software to Predict Thermochemistry
          * New Computational Techniques
          * Validation of Predictive Methods
          * Applications of Techniques to Practical Problems

In addition to the technical presentations, there will be a panel discussion
of the needs for and applications of accurate thermochemical data.  The panel
is intended to represent the users of thermochemical data in areas such as
chemical processing, microelectronics, atmospheric modeling, and the military.

The following speakers have accepted invitations to the symposium: 
A. D. Becke (Queen's University); S. W. Benson (University of Southern
California); J. W. Bozzelli (New Jersey Institute of Technology);
C. J. Cramer (University of Minnesota); L. A. Curtiss (Argonne
National Laboratory); D. A. Dixon (Pacific Northwest National Laboratory);
E. S. Domalski (National Institute of Standards and Technology);
R. S. Drago (University of Florida); K. Harrison (University of Southern
Alabama);  A. J. Holder (University of Missouri); T. J. Lee (NASA Ames
Research Center); M. L. Mavrovouniotis (Northwestern University);
C. F. Melius (Sandia National Laboratories); G. A. Petersson (Wesleyan
University); P. Politzer (University of New Orleans); D. W. Rogers (Long 
Island University); P. E. M. Siegbahn (University of Stockholm); T. Ziegler
(The University of Calgary).

[Abstract deadline was Apr. 19.]

Dr. Karl K. Irikura                      	Dr. David J. Frurip
National Institute of Standards & Technology 	The Dow Chemical Company
(301) 975-2510                          	(517) 636-2446
fax 301-975-3670                        	fax 517-638-6027
irikura @ enh.nist.gov                  	dfrurip @ dow.com




>From jkl@ccl.net Mon May 13 13:30 EDT 1996
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From: Jan Labanowski <jkl@ccl.net>
Date: Mon, 13 May 1996 13:29:54 -0400
Message-Id: <199605131729.NAA01490@krakow.ccl.net>
To: chemistry@www.ccl.net
Subject: ACES II/ab initio workshop in June (Gainesville, FL)
Cc: jkl@ccl.net, lindsay@qtp.ufl.edu
Content-Type: text
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Dear CCL subscribers,

Rod Bartlett and the authors of ACES II are tentatively planning a fourth
ACES II, and ab initio quantum chemistry workshop, to be held in June, at
the University of Florida, Gainesville, FL. Through a cooperative arrangement
with IBM, the workshop will be conducted on the new IBM 39H workstations. 
he tuition  for the three and one-half day course is $500. Housing will be
available at the Reitz Union hotel on campus at $30-40 a day. The intent
of this message is to inquire whether there is sufficient interest to
finalize the dates of the proposed workshop. Attendance is limited to
20 people. If interested, please contact aces2@qtp.ufl.edu."

Denise Lindsay
lindsay@qtp.ufl.edu



From Jeffrey.Gosper@brunel.ac.uk  Wed May 15 05:53:03 1996
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Date: Wed, 15 May 1996 09:59:28 BST
From: Jeffrey J Gosper <Jeffrey.Gosper@brunel.ac.uk>
Reply-To: Jeffrey.Gosper@brunel.ac.uk
Subject: Re: Z-matrix generation
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After Conor McMenamin's success in producing GridView as one of his final year 
undergraduate projects (see 
http://www.brunel.ac.uk/depts/chem/ch241s/re_view/tagon.htm)
and the imminent (free) release of Re_View by SoftShell to all individuals
(see http://www.brunel.ac.uk/depts/chem/ch241s/re_view/re_view.htm
we are currently considering writing such a program which runs under Windows and 
would distribute it as freeware (the only matter stopping us is being able to 
find a little funding to cover Conor's expenses over the summer - any 
suggestions/contributions?).

What features would people like to see in such a program?

/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\
 Dr. Jeff Gosper                                         
 Dept. of Chemistry		                        
 BRUNEL University                                     
 Uxbridge Middx UB8 3PH, UK                            
 voice:  01895 274000 x2187                            
 facsim: 01895 256844                                  
 internet/email/work:   Jeffrey.Gosper@brunel.ac.uk     
 internet/WWW: http://http1.brunel.ac.uk:8080/~castjjg 
Re_View's Home page (A molecular display/animation/analysis program):
   http://http1.brunel.ac.uk:8080/depts/chem/ch241s/re_view/re_view.htm
\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/



From wipff@chimie.u-strasbg.fr  Wed May 15 09:53:06 1996
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Date: Wed, 15 May 1996 15:14:56 +0200
To: CHEMISTRY@www.ccl.net
From: wipff@chimie.u-strasbg.fr (Georges WIPFF)
Subject: EEC grant



Concerns: candidates for a post-doct or PhD position. EEC grant.


I am presently looking for an EEC candidate, either as a  PhD student (for
2-3 years) or as post-doct (for 2 years).

Theme of research: "Computer simulations on ion complexation and extraction
by ionophores".

Methods:  quantum mechanics on model systems "in the gas phase" + molecular
dynamics on complex systems in solution.

Background: physical / theoretical chemisty.

=46inancial support: EEC grant for 2-3 years (Ph-D) or 2 years (post-doct),
following the EEC rules and requirements. Candidates must be from one of
the 12 EEC countries (excluding France), without having stayed previously
in France for more than 18 months. Age : less than 35.

Timing: applications have to be sent by June - July to Bruxels. Planed
starting date for the stage: January 1997.

Applications: send a letter + CV to

 Prof. G. Wipff
=46aculte de chimie
4, rue Blaise Pascal
67070 STRASBOURG CEDEX
=46rance

T=E9l=E9phone (33) 88.41.60 71
=46AX       (33) 88.41.61 04

        E-mail: wipff@crypt.u-strasbg.fr




From wipff@chimie.u-strasbg.fr  Wed May 15 10:19:29 1996
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Date: Wed, 15 May 1996 15:12:37 +0200
To: CHEMISTRY@www.ccl.net
From: wipff@chimie.u-strasbg.fr (Georges WIPFF)
Subject: EEC grant 




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!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
!!!!!!!!!!!!!!!!!!!!!!!!!!!!,!!!")3`!$`8#%2f5%Ifm$`8!!34J)!!*!!!
#)3`!$`8$%2lQ%3"9%`)A!`!!!!!!!!3I3!)!!!B!!!!!!!!!""m3![rr!!!!!3!
!!!!!!!!!!!%!!!"$!!!!4!!!!%8!!!#l!!!![!!!!4N!!!%E!!!"N3!!!C)!!!(
"!!!"`J!!!YF!!!,B!!!$5`!!!d`!!!0b!!!$F`!!!i-!!!19!!!$UJ!!!m%!!!2
)!!!$b3!!!q3!!!2j!!!$r!!!""i!!!3I!!%K$!!2!!%K$!!2!!%K$!!2!!%K$!!
2!!)K$!!2!!%K$!!2!!)K$!!2!!%K$!!2!!)K$!!2!!%K$!!2!!%K$!!2!!%K$!!
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5!!%K$!!2!!!"!!!!"S!!"!!!!3!!!!Bb!!!'I`!&!!F!!!!#!!-!"!!0!!i!$`!
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("AX$i!!#!!!!5!")!!!!!!-0!KS!!J!!!'3!!!!"!!%"!3!#!!%R$`!"!!%!!!!
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"S#jS"BN'T34Z"U8!!!,&%J#!!3!"!!&!C!!!!!!!5!!B$bdk6'&cCA*AFQPdCA)
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#eJ!!!em!!!0Y!!!$F!!!!h%!!!0c!!!$G!!!!i)!!!1$!!!$`!!!!mF!!!2)!!!
$qJ!!!rX!!!3H!!!%(`!#!!!#I!!!J!)!!!*q!!#!!J!!"K)!!!!#!!!#X`!!!!)
!!!Ba!!!!!J!!!cJ!!)!#!!!'-J!!!!)!!!0L!!#!!J!!"Md!!)!#!!!$b!!!J!)
!!!C3!!#!!J!!"!i!!!!#!!!'8J!!!!)!!!3[!!#!!J!!"P-!!!!#!!!&B!!!J!)
!!!CR!!#!!J!!"HN!!)!#!!!'G3!!!!)!!!Ak!!#!!J!!"RB!!)!#!!!&l!!!!!)
!!!Ak"3)!!J!!!8H!!!!#!!!'G`!!!!)!!!Cq!!!!!J!!!B5!!)!#!!!'I`!!!!)
!!!)%J!!!!J!!"If!!!!h&@aPG(4bC5"RFQ&ZG#e&48-Y5%9*4!!05'&bFRNJ3f&
XB@KKEJ!!$8KKFR*j)%0KE'&SB@i!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
!!!!Ve3!!:


--========================_15871754==_--


From qipvigap@lgdx02.lg.ehu.es  Wed May 15 10:53:06 1996
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	by www.ccl.net (8.7.1/950822.1) id KAA22736; Wed, 15 May 1996 10:16:03 -0400 (EDT)
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Date: Wed, 15 May 1996 16:06:41 +0000
To: chemistry@www.ccl.net
From: qipvigap@lgdx02.lg.ehu.es (Pablo Vitoria)
Subject: Transition metals in MOPAC


Hi,

I've used MOPAC 6.0 for some calculations on organic molecules. But now I'd
like to calculate energies and molecular orbitals of large inorganic
molecules containing W, Mo, V or Nb atoms (polyoxoanions).I know these kind
of calculations can be done with EH methods. But I cannot find any
parameters for those heavy atoms for any of the semiempirical methods used
by MOPAC.
Can anybody help pointing to some literature about the subject or
suggesting the use of other programs or methods for that kind of molecules?
 Besides, I'd like to calculate the nteraction of those anions with
aromatic rings, to compare the theoretical results with the crystal
structure of some compounds. Can this be done with MOPAC?

Thank you very much for any help.

Pablo



--------------------------------------------------------------------------------
Pablo Vitoria Garcia
Departamento de Quimica Inorganica, Facultad de Ciencias
Universidad del Pais Vasco (UPV/EHU)
Apartado 644, E-48080 Bilbao
SPAIN
Phone: +34 4 4647700 Ext. 2450
----------------------------------------------------------------------------
----



From EABCM3@jazz.ucc.uno.edu  Wed May 15 11:53:08 1996
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	by www.ccl.net (8.7.1/950822.1) id LAA23840; Wed, 15 May 1996 11:47:17 -0400 (EDT)
From: <EABCM3@jazz.ucc.uno.edu>
Received: from jazz.ucc.uno.edu by jazz.ucc.uno.edu (PMDF V5.0-4 #11893)
 id <01I4QCN53OE894EKA3@jazz.ucc.uno.edu> for chemistry@www.ccl.net;
 Wed, 15 May 1996 10:47:06 -0600 (CST)
Date: Wed, 15 May 1996 10:47:06 -0600 (CST)
Subject: peptide bond strength
To: chemistry@www.ccl.net
Message-id: <01I4QCN53Y1E94EKA3@jazz.ucc.uno.edu>
X-VMS-To: IN%"chemistry@www.ccl.net"
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dear netters,
  I need data on the energy of a typical peptide bond,I do not want
just the average C_N bond strength,
                                       Thank You
                                       Ed Boudreaux

From huang@nissan.wavefun.com  Wed May 15 13:53:08 1996
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From: "Wayne Huang" <huang@nissan.wavefun.com>
Message-Id: <9605151043.ZM2331@nissan.wavefun.com>
Date: Wed, 15 May 1996 10:43:46 -0700
In-Reply-To: qipvigap@lgdx02.lg.ehu.es (Pablo Vitoria)
        "CCL:M:Transition metals in MOPAC" (May 15,  4:06pm)
References: <v01510100adbfb009fea4@[158.227.7.121]>
Reply-To: huang@wavefun.com
X-Mailer: Z-Mail (3.2.2 10apr95 MediaMail)
To: chemistry@www.ccl.net, qipvigap@lgdx02.lg.ehu.es (Pablo Vitoria)
Subject: Re: CCL:M:Transition metals in MOPAC
Mime-Version: 1.0
Content-Type: text/plain; charset=us-ascii


On May 15,  4:06pm, Pablo Vitoria wrote:
> Subject: CCL:M:Transition metals in MOPAC
> Hi,
>
> I've used MOPAC 6.0 for some calculations on organic molecules. But now I'd
> like to calculate energies and molecular orbitals of large inorganic
> molecules containing W, Mo, V or Nb atoms (polyoxoanions).I know these kind
> of calculations can be done with EH methods. But I cannot find any
> parameters for those heavy atoms for any of the semiempirical methods used
> by MOPAC.
> Can anybody help pointing to some literature about the subject or
> suggesting the use of other programs or methods for that kind of molecules?
>  Besides, I'd like to calculate the nteraction of those anions with
> aromatic rings, to compare the theoretical results with the crystal
> structure of some compounds. Can this be done with MOPAC?
>
> Thank you very much for any help.
>
> Pablo
>

Hi, Pablo:

Regarding your inquiry about semiempirical methods on transition metals,
Spartan PM3(tm) method can provide the capability for your TM modeling.

This module has been actively under development for three years now, along
with our DFT module, aiming to provide tools for transition metals modeling.
Currently PM3(TM), which includes d-orbitals, has parameters for total of
15 d transition metals (Ti, Cr, Mn, Fe, Co, Ni, Cu, Zr, Mo, Rh, Pd, Hf, Ta
and W) plus Gd from La series.

In addition to PM3(tm), the PM3 module has been added additional parameters.
Boron and Calcium, for the first time, are available in PM3 method.  Moreover,
as some of you are aware, the well-known problem within PM3 model - non-bonded
hydrogen are too attractive - has bee coorected by introducing a repulsive term
between non-bonded hydrogens into the PM3 energy expression. This correction is
a default in PM3(tm) and Option keyword "HHon" in PM3 module.

Hope this helps!

--Wayne

-- 
+---------------------------------------------------------------+
|  Wayne Huang, Ph.D.    	|  18401 Von Karman, Suite 370  | 
|  Computational Chemist 	|  Irvine, California 92715     |
|  Wavefunction, Inc.    	|  714-955-2120 <> 955-2118(fax)|  
|  huang@wavefun.com     	|  Web: http://www.wavefun.com  |
+---------------------------------------------------------------+



From owner-chemistry@ccl.net  Wed May 15 18:53:09 1996
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Date: Wed, 15 May 1996 16:27:52 -0500
From: Steve <consultant@i-55.com>
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From sxr224@anugpo.anu.edu.au  Wed May 15 19:53:12 1996
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	by www.ccl.net (8.7.1/950822.1) id TAA27326; Wed, 15 May 1996 19:27:57 -0400 (EDT)
Received: from surya.anu.edu.au (surya.anu.edu.au [150.203.193.135]) by anugpo.anu.edu.au (8.6.12/8.6.12) with SMTP id JAA13880 for <chemistry@www.ccl.net>; Thu, 16 May 1996 09:27:55 +1000
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Comments: Authenticated sender is <sxr224@pophost>
From: "Shoba Ranganathan" <sxr224@anu.edu.au>
To: chemistry@www.ccl.net
Date: Thu, 16 May 1996 09:09:41 +0000
Subject: CCL: strychnine coordinates
Reply-to: Shoba.Ranganathan@anu.edu.au
Priority: normal
X-mailer: Pegasus Mail for Windows (v2.23)


Hi,

Can anyone send me the coordinates for strychnine:
xyz, PDB, internal coords are OK.  

Thanks

Shoba
===========================================================
Dr. Shoba RANGANATHAN                     
Computational Mol Biology & Drug Design Group
Div. of Biochemistry & Mol. Biology 
John Curtin School of Medical Research                 
Australian National University          Tel: +616-279-8301                           
Canberra ACT 0200                       Fax: +616-249-0415
Australia.              email:Shoba.Ranganathan@anu.edu.au
----------------------------------------------------------


From sxr224@anugpo.anu.edu.au  Wed May 15 19:56:51 1996
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	by www.ccl.net (8.7.1/950822.1) id TAA27334; Wed, 15 May 1996 19:30:29 -0400 (EDT)
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From: "Shoba Ranganathan" <sxr224@anu.edu.au>
To: chemistry@www.ccl.net
Date: Thu, 16 May 1996 09:12:15 +0000
Subject: Homology Modelling question
Reply-to: Shoba.Ranganathan@anu.edu.au
Priority: normal
X-mailer: Pegasus Mail for Windows (v2.23)


Hi,

I require references for the limits of homology
modelling, as well as the percentage of sequence
identity (in case I am unable to locate the reference).

Could you please reply direct to me?  I will summarize
if there is sufficient interest.

Cheers
Shoba
===========================================================
Dr. Shoba RANGANATHAN                     
Computational Mol Biology & Drug Design Group
Div. of Biochemistry & Mol. Biology 
John Curtin School of Medical Research                 
Australian National University          Tel: +616-279-8301                           
Canberra ACT 0200                       Fax: +616-249-0415
Australia.              email:Shoba.Ranganathan@anu.edu.au
----------------------------------------------------------


