From parthi@aero.iisc.ernet.in  Tue Mar  4 03:26:58 1997
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From: S Parthiban <parthi@aero.iisc.ernet.in>
To: chemistry@www.ccl.net
Subject: MPEG files
In-Reply-To: <9702260605.AA08141@hermes.fju.edu.tw>
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Dear Netters:
I would appreciate receiving ftp sites...from where i would like to
download the MPEG files related to chemistry..
Thanks in advance
parthi

From asit@hartree.quantchem.kuleuven.ac.be  Tue Mar  4 04:26:59 1997
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Date: Tue, 4 Mar 1997 09:27:04 +0100 (NFT)
From: Asit Chandra <asit@hartree.quantchem.kuleuven.ac.be>
To: chemistry@www.ccl.net
Subject: information on CIS
Message-Id: <Pine.A41.3.95.970304092354.48314B-100000@hartree.quantchem.kuleuven.ac.be>
Mime-Version: 1.0
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 Dear Friends,

 I will be happy to get informations about the performance of CIS
 (implemented in Gaussian-94) for the calculation of excited state
 energy and geometry.

 Thanks in advance,

-- Asit Chandra


**********************************************************************

             Dr. Asit kumar Chandra
             Laboratory of Quantum Chemistry
             Dept. of Chemistry
             University of Leuven
             Celestijnenlaan 200F
             B-3001 Leuven, Belgium
             e-mail: asit@hartree.quantchem.kuleuven.ac.be
             Ph:  0032-16-327599
             Fax: 0032-16-327992

*********************************************************************


From qfsaulo@usc.es  Tue Mar  4 04:29:12 1997
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From: Saulo Vazquez Rodriguez <qfsaulo@usc.es>
To: Thorsten Koch <acp37@rs1.rrz.Uni-Koeln.DE>
Cc: CCL <chemistry@www.ccl.net>
Subject: Re: CCL:Aromaticity
In-Reply-To: <Pine.A32.3.91.970303173016.144554B-100000@rs3.rrz.Uni-Koeln.DE>
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Dear Thorsten:
The following references can be useful fot you, although they are not 
very recent:
1. S.A. Vazquez, J.S. Andrews, C.W. Murray, R.D. Amos and N.C. Handy, J. 
Chem. Soc. Perkin Trans. 2 (1992) 889.
2. T.J. Lee, J.E. Rice, R.B. Remington and H.F. Schaefer, Chem. Phys. 
Lett., 150 (1988) 63, and previous papers.

Best regards,
		Saulo A. Vazquez


On Mon, 3 Mar 1997, Thorsten Koch wrote:

> 
> Dear CClers!
> 
> At the moment I am doing calculations which have to do with aromaticity. 
> Is anyone in the CCL community aware of any recent references or reviews 
> on what aramaticity actually is and how it can be defined and/or computed 
> and/or measured? The articles I read about this topic are mainly from the 
> 70's.
> Any help will be appreciated.
> 
> Bye, Thorsten
> 
> 
> 
> /-----------------------------------------------------------------\
> |                        Thorsten Koch                            |
> | Institut fuer Physikalische Chemie II der Universitaet zu Koeln |
> |           Luxemburger Str. 116, 50939 Koeln, Germany            |
> |                      acp37@.uni-koeln.de                        |
> |                   Tel. +49 [0]221 470 4816                      |
> \-----------------------------------------------------------------/
> 
> 
> -------This is added Automatically by the Software--------
> -- Original Sender Envelope Address: acp37@rs1.rrz.Uni-Koeln.DE
> -- Original Sender From: Address: acp37@rs1.rrz.Uni-Koeln.DE
> CHEMISTRY@www.ccl.net: Everybody | CHEMISTRY-REQUEST@www.ccl.net: Coordinator
> MAILSERV@www.ccl.net: HELP CHEMISTRY or HELP SEARCH | Gopher: www.ccl.net 73
> Anon. ftp: www.ccl.net   | CHEMISTRY-SEARCH@www.ccl.net -- archive search
>              Web: http://www.ccl.net/chemistry.html 
> 
> 

From rgab@proteus.co.uk  Tue Mar  4 05:27:00 1997
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Message-Id: <199703040910.JAA08125@petersgate.proteus.co.uk>
From: Richard Bone <rgab@proteus.co.uk>
Date: Tue, 4 Mar 1997 09:04:45 GMT
To: jeff@bnpi.com
Subject: AIMPAC plotting 
Cc: CHEMISTRY@www.ccl.net



I have already tried sending the message below to 'jeff@bnpi.com' and
'jeff@jeff.bnpi.com' but it's bounced.  Following the message to CCL,
I'm resending it.

Richard Bone

======================================================================



You might want to contact Dr. Paul Popelier at UMIST, UK. He has a separate
program, 'MORPHY' which produces PostScript output instead of redirecting
data to a plotter.  It is very good and should be virtually platform-
independent;  I ran it on SGI machines quite a lot.  If you check out papers
(co-)authored by P.L.A. Popelier since 1993 you'll see examples of the output.
There are further examples in ...

Bone and Bader, J. Phys. Chem., 100 (26), 10892 - 10911

You can e-mail Popelier at  pla@umist.ac.uk for more information.

Yours,

Richard Bone


~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
|  Richard G. A. Bone,  Ph.D.      |                                   |
|  Senior Computational Chemist    |                                   |
|  Proteus Molecular Design Ltd.   |  Tel:   +44 (0)1625 500555        |
|  Lyme Green Business Park        |  Fax:   +44 (0)1625 500666        |
|  Macclesfield,   Cheshire        |  Email: rgab@proteus.co.uk        |
|  United Kingdom      SK11  0JL   |  Web:   http://www.proteus.co.uk  |
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

From Jeffrey.Gosper@brunel.ac.uk  Tue Mar  4 06:27:01 1997
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          by etamin.brunel.ac.uk with SMTP (PP); Tue, 4 Mar 1997 10:51:31 +0000
Date: Tue, 4 Mar 1997 10:48:24 PST
From: Jeffrey Gosper <Jeffrey.Gosper@brunel.ac.uk>
Subject: Re: CCL:MPEG files
To: S Parthiban <parthi@aero.iisc.ernet.in>
cc: CHEMISTRY@www.ccl.net
Message-ID: <ECS9703041024A@brunel.ac.uk>
Priority: Normal
MIME-Version: 1.0
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On Tue, 4 Mar 1997 13:44:08 -0500 (GMT) S Parthiban wrote:

> From: S Parthiban <parthi@aero.iisc.ernet.in>
> Date: Tue, 4 Mar 1997 13:44:08 -0500 (GMT)
> Subject: CCL:MPEG files
> To: chemistry@www.ccl.net
> 
> Dear Netters:
> I would appreciate receiving ftp sites...from where i would like to
> download the MPEG files related to chemistry..
> Thanks in advance
> parthi
>
Have a look at the pages that I have set up dealing with molecular animations. Many of these are 
MPEGs. However most are much richer in that they contain multistructure XYZ files that can be 
played as animations with viewing from any angle, monitoring/graphing of geometries and energies, 
etc.

Here are some URLs that contain MPEGs.

http://http1.brunel.ac.uk:8080/depts/chem/ch241s/re_view/barry/diels2.htm
http://http1.brunel.ac.uk:8080/depts/chem/ch241s/re_view/diels.htm
http://http1.brunel.ac.uk:8080/depts/chem/ch241s/re_view/exanims.htm
http://http1.brunel.ac.uk:8080/depts/chem/ch241s/re_view/exercise/exer3.htm
http://http1.brunel.ac.uk:8080/depts/chem/ch241s/re_view/cyclohx/cyclohx.htm
http://http1.brunel.ac.uk:8080/depts/chem/ch241s/re_view/re_view3.htm

These all stem for re_View's homepage
 http://www.brunel.ac.uk/depts/chem/ch241s/re_view/re_view.htm

the main simulation pages are:
http://http1.brunel.ac.uk:8080/depts/chem/ch241s/re_view/addconf.htm
dealing with conformational changes and
http://http1.brunel.ac.uk:8080/depts/chem/ch241s/re_view/addreact.htm
simulating reactions.

/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\
 Dr. Jeff Gosper, Dept. of Chemistry, BRUNEL University
 Uxbridge Middx UB8 3PH, UK
 voice:  01895 274000 x2187, facsim: 01895 256844
 internet/email/work:   Jeffrey.Gosper@brunel.ac.uk
 internet/WWW: http://www.brunel.ac.uk/~castjjg
 Re_View's home page (molecular animations or Chem-4D):
        http://www.brunel.ac.uk/depts/chem/ch241s/re_view/re_view.htm
\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/




From david.decorte@unifr.ch  Tue Mar  4 08:27:02 1997
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Hello,

I'm looking for a octahedral Cd2+ force field parameter set. This for
the calculation of polyimine complexes.  
Thanks,

				David 
-- 
David De Corte				
Institute of Inorganic Chemistry	Tel: 0041-26-300.87.52(49)
University Fribourg			Fax: 0041-26-300.97.38
CH-1700 Switzerland			mailto:David.Decorte@unifr.ch
http://www.unifr.ch/

From allouche@piimsdm1.univ-mrs.fr  Tue Mar  4 09:27:02 1997
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Date: Tue, 4 Mar 97 15:00:31 -0800
Message-Id: <9703042300.AA05602@piimsdm1.univ-mrs.fr>
To: chemistry@www.ccl.net
Subject: G94


Dear Colleagues:

Did somebody used the NoOrbRot keyword in CASSCF calculation using GAUSSIAN94 ?
I don't know where to put it CASSCF(NoOrbRot... does not work
Thanks



        PPPPPPPP    II     II   MM     MM 
        PP      P   II     II   MMM   MMM 
        PPPPPPPP    II     II   MM M M MM 
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|       PP          Ii     II   MM     MM                                \   
|                                                                         \  
|  ALLOUCHE Alain                         |                                \ 
|  PIIM - CNRS UMR 6633                   |   Tel : (33) 4.91.28.85.76      |
|  Spectrometrie et Dynamique Moleculaire |   Fax : (33) 4.91.63.65.10      |
|  Campus Universitaire Saint Jerome      |                                 |
|  Service 541                            |   e-mail                        |
|  13397 Marseille Cedex 20 - France      |   allouche@piimsdm1.univ-mrs.fr |
|_________________________________________|_________________________________|


From biosym@risc2.iaif.pa.cnr.it  Tue Mar  4 10:27:02 1997
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From: biosym@risc2.iaif.pa.cnr.it (mail rosetta)
Message-Id: <9703041429.AA20065@risc2.iaif.pa.cnr.it>
To: chemistry@www.ccl.net
Subject: linkage carbohydrates


Dear Netters,

could someone let me know if these is any force field for Amber or Gromos
programs which provides the possibility of handling the 1-1 linkage of
carbohydrates?

ThANKING YOU FOR THE ATTENTION, 


						ROSETTA NOTO
Rosina Noto
CNR-IAIF
Via Archirafi 36
90123 Palermo			Tel. +39-91-6233.222

From chrmiri@techunix.technion.ac.il  Tue Mar  4 10:31:00 1997
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Date: Tue, 4 Mar 1997 17:04:50 +0200 (IST)
From: Miri Karni <chrmiri@techunix.technion.ac.il>
Reply-To: Miri Karni <chrmiri@techunix.technion.ac.il>
To: Thorsten Koch <acp37@rs1.rrz.Uni-Koeln.DE>
cc: CCL <chemistry@www.ccl.net>
Subject: Re: CCL:Aromaticity
In-Reply-To: <Pine.A32.3.91.970303173016.144554B-100000@rs3.rrz.Uni-Koeln.DE>
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Hello,
A very comprehensive book which reviews electronic and structural aspects
of aromatic and aniaromatic compounds with an excellent introduction
to criteria of aromaticity and antiaromaticity is the book by V. I.
Minkin' M.N. Glukhovtsev and B. Y. Simkin. Its Title is: Aromaticity and
Antiaromaticity, Electronic and Structural Aspects" John Weily, 1994.

Miri

******************************************************************************

Dr. Miri Karni                                    
Department of Chemistry                             
Technion - Israel Institute of Technology          
Haifa 32000
Israel

e-mail: chrmiri@tx.technion.ac.il
FAX:972-4-8233735
PHONE:972-4-8292699

******************************************************************************

On Mon, 3 Mar 1997, Thorsten Koch wrote:

> 
> Dear CClers!
> 
> At the moment I am doing calculations which have to do with aromaticity. 
> Is anyone in the CCL community aware of any recent references or reviews 
> on what aramaticity actually is and how it can be defined and/or computed 
> and/or measured? The articles I read about this topic are mainly from the 
> 70's.
> Any help will be appreciated.
> 
> Bye, Thorsten
> 
> 
> 
> /-----------------------------------------------------------------\
> |                        Thorsten Koch                            |
> | Institut fuer Physikalische Chemie II der Universitaet zu Koeln |
> |           Luxemburger Str. 116, 50939 Koeln, Germany            |
> |                      acp37@.uni-koeln.de                        |
> |                   Tel. +49 [0]221 470 4816                      |
> \-----------------------------------------------------------------/
> 
> 
> -------This is added Automatically by the Software--------
> -- Original Sender Envelope Address: acp37@rs1.rrz.Uni-Koeln.DE
> -- Original Sender From: Address: acp37@rs1.rrz.Uni-Koeln.DE
> CHEMISTRY@www.ccl.net: Everybody | CHEMISTRY-REQUEST@www.ccl.net: Coordinator
> MAILSERV@www.ccl.net: HELP CHEMISTRY or HELP SEARCH | Gopher: www.ccl.net 73
> Anon. ftp: www.ccl.net   | CHEMISTRY-SEARCH@www.ccl.net -- archive search
>              Web: http://www.ccl.net/chemistry.html 
> 




From ahocquet@tamarugo.cec.uchile.cl  Tue Mar  4 11:27:04 1997
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Date: Tue, 04 Mar 1997 12:33:15 +0000
From: Alexandre Hocquet <ahocquet@tamarugo.cec.uchile.cl>
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Organization: Universidad de Chile
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To: Thorsten Koch <acp37@rs1.rrz.Uni-Koeln.DE>
Cc: chemistry@www.ccl.net
Subject: Re: CCL:Aromaticity
References: <Pine.A32.3.91.970303173016.144554B-100000@rs3.rrz.Uni-Koeln.DE>
Content-Type: text/plain; charset=iso-8859-1
Content-Transfer-Encoding: 8bit


Thorsten Koch wrote:

> Is anyone in the CCL community aware of any recent references or reviews
> on what aramaticity actually is and how it can be defined and/or computed
> and/or measured? The articles I read about this topic are mainly from the
> 70's.

Dear Thorsten,

I have recently seen a review about aromaticity in the Journal of
Chemical 
Education. I dont  remember what it exactly deals about, nor i remember
the 
exact reference. If it is not february 1997, nor january 1997, then it
is 
certainly december 1996 ,or was it november 1996? ;-)
Maybe somebody in the list has the exact reference...

Also, in the ECC1 conference in 1994, a communication by Jiao and von
Rague Schleyer (Antiaromaticity : evidence from magnrtic criteria)
quote  reviews :

Minkin, Glukhotshev, Simkin "Aromaticity and Antiaromaticity :
Electronic and
Structural aspects", Wiley, New York, 1994

Garratt, "Aromaticity", Wiley, New York, 1986

Hope this helps,
-- 
Alexandre Hocquet

Laboratorio de Cristalografía
Facultad de Ciencias Físicas
Universidad de Chile
Blanco Encalada, 2008
Santiago Centro
Chile
fono : 56 2 678 45 19
fax : 56 2 696 73 59
email : ahocquet@cec.uchile.cl


From laaksone@csc.fi  Tue Mar  4 11:29:21 1997
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To: S Parthiban <parthi@aero.iisc.ernet.in>
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In-Reply-To: <Pine.SOL.3.91.970304133221.17380A-100000@aero.iisc.ernet.in>
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Hi,

I have a collection of some animations of my own and from CSC and a lot of
links further at:

http://www.csc.fi/lul/chem/graphics.html

Regards,

-leif laaksonen

On Tue, 4 Mar 1997, S Parthiban wrote:

> Dear Netters:
> I would appreciate receiving ftp sites...from where i would like to
> download the MPEG files related to chemistry..
> Thanks in advance
> parthi
> 
> -------This is added Automatically by the Software--------
> -- Original Sender Envelope Address: parthi@aero.iisc.ernet.in
> -- Original Sender From: Address: parthi@aero.iisc.ernet.in
> CHEMISTRY@www.ccl.net: Everybody | CHEMISTRY-REQUEST@www.ccl.net: Coordinator
> MAILSERV@www.ccl.net: HELP CHEMISTRY or HELP SEARCH | Gopher: www.ccl.net 73
> Anon. ftp: www.ccl.net   | CHEMISTRY-SEARCH@www.ccl.net -- archive search
>              Web: http://www.ccl.net/chemistry.html 
> 
> 

-------------------------------------------------------------------
Leif Laaksonen                     |  
Center for Scientific Computing    | Phone:      358 9 4572378
P.O. Box 405                       | Mobile:     358 400425203
FIN-02101 Espoo                    | Telefax:    358 9 4572302
FINLAND                            | Mail:  Leif.Laaksonen@csc.fi
-------- URL: http://laaksonen.csc.fi/leif.laaksonen.html ---------




From elewars@alchemy.chem.utoronto.ca  Tue Mar  4 11:34:20 1997
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Date: Tue, 4 Mar 1997 11:17:44 -0500 (EST)
From: "E. Lewars" <elewars@alchemy.chem.utoronto.ca>
Message-Id: <199703041617.LAA04311@alchemy.chem.utoronto.ca>
To: chemistry@www.ccl.net
Subject: AROMATICITY REFS



1997  March 4


Hello, Thorsten Koch asked for refs to aromaticity.  Here are a few.

 (Apologies to all authors whose names have been omitted)


1       Arom. and antiarom.:
        Schleyer et al, Ang Chem Int Ed Engl, 34 (1995) 334

2       Bond separation E's as an arom. measure:
        Chestnut, J Comp Chem, 16 (1995) 1227

3       Arom of an annulene:
        Mitchell and Iyer, JACS, 118 (1996) 722

4       Olefinic vs. arom. character:
        Sulzbach et al, JACS, 118 (1996) 3519

5       A simple test for aromaticity:
        Schleyer et al, JACS, 118 (1996) 3519

6       Arom of H clusters:
                        J Phys Chem, 100 (1996) 12299


7       Arom and heterocycles:
        Schleyer et al, Ang Chem Int Ed Engl, 35 (1996) 2638

8       "Aromaticity Today"
        M. Glukhovtsev,  J Chem Educ, 74 (1997) 132


  Some refs to resonance/electron delocalization in benzene.  Most are
theoretical, concerning the role of the sigma vs. the pi electrons.
1) Claim that the pi electrons are *localized*: Nature 1986, 323, 699;
2) same authors: Chap. in "Valence Bond Theort and Chemical Structure",
Elsevier, 1990, pp 287-349.
3) JACS 1993, 115, 10925
4) JACS 1993, 115, 10938
5) JACS 1993, 115, 10943
6) JACS 1993, 115, 10952
7) The Mills-Nixon effect: Ang Chem Int Ed 1994, 33, 1721
8) The Mills-Nixon effect: Ang Chem Int Ed 1995, 34, 1454
9) J Phys Chem 1994, 98, 10048
10) J Phys Chem 1995, 99, 2307
11) J Am Chem Soc 1995, 117, 7760
12) Article on forcing benzene rings to cyclohexatriene struct:
    Chemical and Engineering News 1996, 1 April, p 27.


  E. Lewars
================

From chemtw@showme.missouri.edu  Tue Mar  4 12:27:05 1997
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Dear CCler's,

I am trying to output a radial distribution function using CHARMM for a
peptide atom that is surrounded by TIP3P waters.  I have seen the examples
for doing pure solvent but can not seem to make it work for selecting a
peptide atom in the peptide with the solvent being TIP3P waters.

What should the input file look like for doing this sort of analysis?  If
anyone has an example input file, that would be helpful also.
 

****************************************
Troy Wymore
Department of Chemistry
University of Missouri-Columbia
Columbia, MO 65211

e-mail: chemtw@showme.missouri.edu
http://www.missouri.edu/~chemtw/troy.html
*****************************************


From ccl@www.ccl.net  Mon Mar  3 18:45:45 1997
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Message-Id: <199703032237.RAA04566@chims1.CHIMCN.UMontreal.CA>
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    I would very appreciate if someone could help me in the following:

    I have to perform a relativistic atomic numerical calculation. 
I need a program that integrate numerically the one-electron radial 
schrodinger equation associated with each spin-orbital to be used as 
reference orbitals. I have interest in the results using the local 
spin density limit. 

    Thanks;
       Helio

-- 

  ***************************************************************************
  * From  Helio Anderson Duarte                                             *
  *       Department of chemistry     Departement de Chimie                 *
  *       University of Montreal      Universite de Montreal                *
  *       C.P. 6128, succ A           FAX (514) 343-2468                    *
  *       Montreal, Quebec            Phone (514) 343-6111  Poste 3994      *
  *       H3C3J7                      internet: duarteh@chimcn.umontreal.ca *
  *       Canada                                                            *
  ***************************************************************************


From hutschka@quantix.u-strasbg.fr  Tue Mar  4 13:27:13 1997
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Hello,

A simple question:

Could somebody suggest a reference where there are nice and
explicit (with axes, sign) drawings of f orbitals ?

Thanks a lot.

 
=============================================================================
¤  François HUTSCHKA                 Ph.D. Student in Quantum Chemistry     ¤
¤                                                                           ¤
¤  Laboratoire de Chimie Quantique                                          ¤
¤  UPR 139 du CNRS                                                          ¤
¤  4, rue Blaise Pascal              Phone:  (33).3.88.41.60.32             ¤
¤  67000 STRASBOURG                  Fax:    (33).3.88.61.20.85             ¤
¤  FRANCE                            E-Mail: hutschka@quantix.u-strasbg.fr  ¤
=============================================================================


From duarteh@CHIMCN.UMontreal.CA  Tue Mar  4 13:39:01 1997
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   Hi Everybody;  
 
    I would very appreciate if someone could help me in the following:

    I have to perform a relativistic atomic numerical calculation. 
I need a program that integrate numerically the one-electron radial 
schrodinger equation associated with each spin-orbital to be used as 
reference orbitals. I have interest in the results using the local 
spin density limit. 

    Thanks;
       Helio

-- 

  ***************************************************************************
  * From  Helio Anderson Duarte                                             *
  *       Department of chemistry     Departement de Chimie                 *
  *       University of Montreal      Universite de Montreal                *
  *       C.P. 6128, succ A           FAX (514) 343-2468                    *
  *       Montreal, Quebec            Phone (514) 343-6111  Poste 3994      *
  *       H3C3J7                      internet: duarteh@chimcn.umontreal.ca *
  *       Canada                                                            *
  ***************************************************************************

From stefan@indi.aci.uni-heidelberg.de  Tue Mar  4 14:27:06 1997
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From: "Stefan Beyreuther" <stefan@indi.aci.uni-heidelberg.de>
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Date: Tue, 4 Mar 1997 19:56:26 +0100
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On Tue, 4 Mar 1997 13:44:08 -0500 (GMT) S Parthiban wrote:

> From: S Parthiban <parthi@aero.iisc.ernet.in>
> Date: Tue, 4 Mar 1997 13:44:08 -0500 (GMT)
> Subject: CCL:MPEG files
> To: chemistry@www.ccl.net
>
> Dear Netters:
> I would appreciate receiving ftp sites...from where i would like to
> download the MPEG files related to chemistry..
> Thanks in advance
> parthi

You might want to have a look at the pages of Brickmann group, Darmstadt,
Germany:

http://www.pc.chemie.th-darmstadt.de/brickmann/
http://www.pc.chemie.th-darmstadt.de/molcad/movie.html

Regards
Stefan

-- 
        Stefan Beyreuther
                                         Anorganisch-Chemisches Institut
        fon +49-6221-548634                      Universitaet Heidelberg
        fax +49-6221-545707                             69120 Heidelberg
        e-mail stefan@indi.aci.uni-heidelberg.de                 Germany

From h.rzepa@ic.ac.uk  Tue Mar  4 14:29:15 1997
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>Dear Netters:
>I would appreciate receiving ftp sites...from where i would like to
>download the MPEG files related to chemistry..
>Thanks in advance
>parthi

We were keen on MPEG around 1992, but abandoned it
largely in favour of hyperactive molecules;
http://www.ch.ic.ac.uk/chemime/
where the user can experiment with the data, rather than having
a predetermined view imposed upon them.
Might  I highlite the work of a colleague, Arie Aizman, and
his work on symmetry which exemplifies perfectly why we
abandoned MPEG in favour of richer formats;

http://www.ch.ic.ac.uk/vchemlab/symmetry/

and in particular the molecular vibrations section.

For more complex surfaces (ie  MOs, ESPs etc etc),
one would use  VRML instead of MPEG.

Perhaps the simplest concept which explains why MPEG
is not promoted is that it cannot be easily indexed!  Molfiles,
PDB files, VRML files etc are all more easily indexed than
MPEG.


Dr Henry Rzepa,  Dept. Chemistry,  Imperial College,  LONDON SW7 2AY;
rzepa@ic.ac.uk; Tel  (44) 171 594 5774; Fax: (44) 171 594 5804.
URL: http://www.ch.ic.ac.uk/rzepa/ 



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Mail*Link=AE SMTP               CCL:Info needed: substructures search*

Hello everyone,

  I am interested in knowing more about the choice of algorithms and
different approaches for efficient chemical substructure searching. Can
anyone on the list give me knowledgeable recommendations about:

(1) Key recent papers
(2) Published algorithms
(3) Code in the public domain or available as shareware

  I will summarise the results for the list.

                                Thank you in advance,
=20
                                    Sincerely yours,
                                         Toly
--=20
______________________________________________________________________
Anatoli O. Krassavine     =20
kras@nmr1.ioc.ac.ru

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From lykos@charlie.cns.iit.edu  Tue Mar  4 15:27:09 1997
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Date: Tue, 4 Mar 1997 13:57:10 -0600 (CST)
From: Peter Lykos <lykos@charlie.cns.iit.edu>
To: chemistry@www.ccl.net
Subject: Computational Chemistry Outreach in India
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With over 900 million people and a high rate of college and university
educated persons with few good job opportunities, access to computer-based
enhancements to problem solving is important - and - given the relatively
low cost of table top computers - relatively accessible.

There are a large number of chemistry trained persons in the world. They
hae a common language and generally good rapport. Because there are so
many each can become a source of computer-based enhancements to problem
solving in their respective communities. India is ripe for an influx of
opinions and facts from world class and credible computational chemists.

The ICCCRE has as one of its goals the bringing of a cadre of world classs
experts in some aspects of computer-based enhancements to problem solving
that are quite exportable to disciplines other than chemistry.

Yound persons generally do not have either the where-with-all for foreign
travel to specialized conferences elsewhere or good information as to
which are organized such as to provide good channels of communication with
experts for discussion - including one on one. ICCCRE finesses that
barrier.

Furthermore, the science policy makers in the host country who determine
where the limited resources should go for maximum return are not certian
that what they hear from their countrymen represent an enlightened and
objective perspective as to what is current and choice rather than self
serving. ICCCRE provides that opportunity.

The XIIth ICCCRE is not yet fully formed. The convenor, Professor Gadre at
the University of Pune, is on the lookout for persons who are world class
computational chemists and interested in and willing to come to Pune the
week of 4 Jan 98 to participate in that week long conference as either
session organizers, session presentors, poster presentors or as
cosponsoring companies interested in developing a presence in India as
parst of an associated exposition.

The session key noters will be invited to generate a provocative statement
in their areas of expertese inviting comments to be shared via electronic
conferencing.

By way of facilitating the whole process there has been created a home
page for the XIIth ICCCRE at Beloit College including a link to Professor
Gadre. Please at least dialog with Gadre and share your suggestions and
perhaps interest in participating. The home page is at:
www.beloit.edu/~chem/ICCCRE.html.

Any specific questions you feel I might be able to help with can be sent
via link by accessing my home page: www.iit.edu/~lykos .

Thanks for your patience if you got this far!!

Pune in 98!

Peter Lykos


From robert@pauli.utmb.edu  Tue Mar  4 19:27:09 1997
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From: "Robert Fraczkiewicz" <robert@pauli.utmb.edu>
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Date: Tue, 4 Mar 1997 17:42:03 -0600
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======================================================================

   Structural Biology Symposium 1997
   April 11-13, 1997
   University of Texas Medical Branch at Galveston
   Sealy Center for Structural Biology

Dear Colleagues:

We would like to invite you and your colleagues to participate
in the UTMB Structural Biology Symposium organized by the
Sealy Center for Structural Biology and the Department of
Human Biological Chemistry & Genetics of the University of
Texas Medical Branch at Galveston, TX. The meeting will start
on Friday April 11 afternoon at 4:00 pm and ends on Sunday at noon.

For details on the program and electronic registration
visit our symposium WEB page
http://www.scsb.utmb.edu/symposium.html

For further information contact

Structural Biology Symposium
Shirley Broz
Department of Human Biological Chemistry & Genetics
University of Texas Medical Branch at Galveston
5.138 Medical Research Building
Galveston, TX 77555-1055
Phone: (409) 772-2281
FAX: (409) 772-4298
E-mail: SBroz@mspo1.med.utmb.edu


We look forward to your participation.
On behalf of the organizing committee

Werner Braun
Professor
Sealy Center for Structural Biology
Department of Human Biological Chemistry & Genetics

========================================================================

For Prof. Werner Braun
  Robert Fraczkiewicz
  University of Texas Medical Branch
  Galveston, TX 77555, U.S.A.



From scip5031@leonis.nus.sg  Tue Mar  4 22:27:09 1997
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Date: Wed, 5 Mar 1997 10:31:33 +0800 (SST)
From: "FANG L." <scip5031@leonis.nus.sg>
To: chemistry@www.ccl.net
Subject: summary
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Dear CCL reader:
I promise to give a summary on the question as:
I want to some references about calculation of electronic structure  of
oxide or halide glass systems. 
Also I want to know which program ( ab initio or semiempirical) can treat
elements like Mo, Cu, W, Ag and V. 

Here is the answers I received till now:

From: V Sundararajan <sundar@cdac.ernet.in>
To: "FANG L." <scip5031@leonis.nus.sg>
Subject: Re: CCL:ccl: electronic structure of glass

Dear Fang,
	For electronic structure of elements you may use LMTO
(Linear Muffin-Tin Orbital method, full-potential version) could be
used.
	Contact Prof. O.K. Andersen at
andersen@radix2.mpi-stuttgart.mpg.de

regards
sundar

----------------------------------------------------------------------
 V. Sundararajan,  Applications group 
                   Centre for Development of Advanced Computing  
                   Pune University Campus,  Pune 411 007    
                   Phone: 352461/79/83/84 Ext 341/342  Direct 370098
                   Fax  : +91 212 357551	          
                   e-mail: sundar@cdac.ernet.in
----------------------------------------------------------------------

From alain.kessi@psi.ch Wed Mar  5 10:17:31 1997
Date: Fri, 31 Jan 1997 10:00:01 +0100
From: Alain Kessi <alain.kessi@psi.ch>
To: "FANG L." <scip5031@leonis.nus.sg>
Subject: Re: CCL:ccl: electronic structure of glass

Dmol, a DFT code commercially sold by MSI (http://www.msi.com), will
deal with all atoms which can be treated non-relativistically.

-- Alain Kessi (alain.kessi@psi.ch), at Paul Scherrer Institut, Zurich
     ++++ stop the execution of Mumia Abu-Jamal ++++
 ++++ if you agree copy these 3 sentences in your own sig ++++
++++ see: http://www.xs4all.nl/~tank/spg-l/sigaction.htm ++++

From echamot@xnet.com Wed Mar  5 10:17:52 1997
Date: Fri, 31 Jan 97 09:36:07 CST
From: Ernest Chamot <echamot@xnet.com>
To: "FANG L." <scip5031@leonis.nus.sg>
Subject: Re: CCL:ccl: electronic structure of glass

Hi Dr. Ling,

I too would be interested in:

>I want to some references about calculation of electronic structure  of
>oxide or halide glass systems.

Please summarize the replies to the list.

So far as  your request:

>Also I want to know which program ( ab initio or semiempirical) can treat
>elements like Mo, Cu, W, Ag and V.

The Chamot Labs web page maintains a Periodic Table of the Elements, giving
the computational methods available for each element.  Molybdenum, for
instance, can be modeled with the MM2+, SYBYL, and ESFF force fields; INDO/1
and PM3(tm) semiempirical parameterizations; and the STO-nG, n-21-G, DNP,
MINI, MIDI, and ECP ab initio basis sets.  There is also a summary of
modeling methods and which methods and capabilities are available within the
different software packages.  (I try to keep this up to date, but if anyone
has information to add, or a correction to make, I welcome the input.)  The
Chamot Labs web page is currently at:

 http://www.xnet.com/~chamotlb

but we are in the process of moving to www.chamotlabs.com.

EC
---
Ernest Chamot
Chamot Labs, Inc.
530 E. Hillside Rd.
Naperville, Illinois 60540
(630)637-1559
echamot@xnet.com
http://www.xnet.com/~chamotlb

From: tom.huff@owenscorning.com
To: "'scip5031@leonis.nus.sg'" <scip5031@leonis.nus.sg>
Subject: Oxide & Halide Glasses

If you receive any references, I would be interested in learning about
them.  I think there is very little out there because the size of the
cluster needed to adequately represent the amorphous structure of oxide
glasses make such calculations extremely long.  There have been some
calculations on SiO2 clusters (with Gaussian) containing about 15 or so
heavy atoms (terminated with H) by people at NIST in the United States. 
(I can't locate the author's names).  There has also been some work
reported by Corning Inc. on defect centers in SiO2 glass.  Again, I
can't locate the actual reference but one of the authors of that work
may be M. P. Teter.  Sorry I could not be of more help.

Please do not associate my name with these comments in any summary to
the entire CCL list.

Dr. **** ***
----------------------------------------------------
     _/_/_/_/          FANG Ling
    _/                 Dept. of Physics    
   _/_/_/_/            National Univ. of Singapore 
  _/                   Lower Kent Ridge Rd.
__/    _/              Singapore 119260       
      _/               Tel.7722605 
     _/
    _/_/_/
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