From chemtw:~at~:showme.missouri.edu Tue Mar 4 12:27:05 1997 Received: from mail.missouri.edu for chemtw {*at*} showme.missouri.edu by www.ccl.net (8.8.3/950822.1) id LAA28674; Tue, 4 Mar 1997 11:56:02 -0500 (EST) Received: from black.missouri.edu (black.missouri.edu [128.206.2.222]) by mail.missouri.edu (8.8.5/8.8.5) with ESMTP id KAA79876 for ; Tue, 4 Mar 1997 10:56:00 -0600 Received: from localhost (chemtw.,at,.localhost) by black.missouri.edu (8.8.5/8.8.5) with SMTP id KAA35484 for ; Tue, 4 Mar 1997 10:56:01 -0600 X-Authentication-Warning: black.missouri.edu: chemtw owned process doing -bs Date: Tue, 4 Mar 1997 10:56:00 -0600 (CST) From: Troy Wymore X-Sender: chemtw(+ at +)black.missouri.edu To: chemistry ^%at%^ www.ccl.net Subject: Solvent analysis in CHARMM Message-ID: MIME-Version: 1.0 Content-Type: TEXT/PLAIN; charset=US-ASCII Dear CCler's, I am trying to output a radial distribution function using CHARMM for a peptide atom that is surrounded by TIP3P waters. I have seen the examples for doing pure solvent but can not seem to make it work for selecting a peptide atom in the peptide with the solvent being TIP3P waters. What should the input file look like for doing this sort of analysis? If anyone has an example input file, that would be helpful also. **************************************** Troy Wymore Department of Chemistry University of Missouri-Columbia Columbia, MO 65211 e-mail: chemtw#* at *#showme.missouri.edu http://www.missouri.edu/~chemtw/troy.html *****************************************