From chemistry-request ":at:" server.ccl.net Tue Mar 28 00:02:36 2000 Received: from iris.sipp.ac.cn ([202.127.25.14]) by server.ccl.net (8.8.7/8.8.7) with SMTP id AAA30586 for ; Tue, 28 Mar 2000 00:02:28 -0500 Received: from iris.sipp.ac.cn (202.127.25.133) by iris.sipp.ac.cn (EMWAC SMTPRS 0.81) with SMTP id ; Tue, 28 Mar 2000 13:05:32 +0800 Sender: user $#at#$ ccl.net Message-ID: <38E03CAB.17E7410 -x- at -x- iris.sipp.ac.cn> Date: Tue, 28 Mar 2000 13:01:31 +0800 From: Mao Xiang Organization: iris.sipp.ac.cn X-Mailer: Mozilla 4.51C-SGI [en] (X11; I; IRIX 6.3 IP32) X-Accept-Language: en MIME-Version: 1.0 To: chemistry -x- at -x- ccl.net Subject: problem in TS searching Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit Hello everyone: I met a strange thing in transition state searching in MOPAC. There are three reactants, HOCH2CH2NH2, H2O and HCONH2 to complete the reaction like the following: NH2 | HOCH2CH2NH2+H2O+HCONH2--->(+)NH3CH2CH2O(-)+ H2O +HCONH2 ---> (+)NH3CH2CH2O-C-O(-) +H2O | H I use pseudo reaction coordinate technique to find the transtion state of the first reaction, but when I use PM3 MMOK TS PRECISE to refine it, I failed. Then I cut off the HCONH2 from the system, I can refine the first TS I got, because I got one negative frequency. Does anyone have some experients about the problem I met, hope you can give me some suggestion. Thank in advance. Regards, mao ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | Mao Xiang | | Lab of Molecular Regulation for Microbial Secondary Metabolism | | Shanghai institute of Plant Physiology, Academia Sinica | | 300 Fenglin Road, Shanghai, China, 200032 | | Tel: +86-21-64042090-4791 | | Fax: +86-21-64042385 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~