From chemistry-request "-at-" ccl.net Mon Jul 28 11:35:59 2003 Received: from mailer.gwdg.de (mailer.gwdg.de [134.76.10.26]) by server.ccl.net (8.12.8/8.12.8) with ESMTP id h6SFZw47009003 for ; Mon, 28 Jul 2003 11:35:59 -0400 Received: from vrlab03.mpibpc.gwdg.de ([134.76.211.99] helo=mpi-bpc.mpg.de) by mailer.gwdg.de with esmtp (Exim 4.20) id 19hA2X-0005Rc-N8 for chemistry{at}ccl.net; Mon, 28 Jul 2003 17:35:57 +0200 Message-ID: <3F2542D6.40308{at}mpi-bpc.mpg.de> Date: Mon, 28 Jul 2003 17:35:50 +0200 From: Vlad Cojocaru User-Agent: Mozilla/5.0 (X11; U; Linux i686; en-US; rv:1.0.1) Gecko/20020823 Netscape/7.0 X-Accept-Language: en-us, en MIME-Version: 1.0 To: CCL Subject: Amber and Namd Content-Type: text/plain; charset=us-ascii; format=flowed Content-Transfer-Encoding: 7bit X-Spam-Report: -0.5/6.0 ---- Start SpamAssassin results -0.50 points, 6 required; * -0.5 -- User-Agent header indicates a non-spam MUA (Mozilla) ---- End of SpamAssassin results X-Spam-Level: / X-Virus-Scanned: (clean) by exiscan+sophie Dear CCLers, Does anyone have any experience with using both Amber and Namd for MD simulations. I would like to discuss a bit the Berendsen coupling scheme for Temperature in the 2 software packages. If somebody is aquented with this and has a bit of time could you give me a telephone number where I can call and also let me know a good time for calling...its hard to describe on the email Thank you very much in advance, Best regards, vlad -- Vlad Cojocaru Max Planck Institute for Biophysical Chemistry Department: 060 Am Fassberg 11, 37077 Goettingen, Germany tel: ++49-551-201.1327 e-mail: Vlad.Cojocaru{at}mpi-bpc.mpg.de home tel: ++49-551-9963204