From owner-chemistry-: at :-ccl.net Tue Sep 11 11:50:00 2007
From: "chupvl chupvl..gmail.com" <owner-chemistry#server.ccl.net>
To: CCL
Subject: CCL: Data mining/clustering software
Message-Id: <-35128-070911110452-11061-h+Qq0spj//HnsoJ5P2AkOQ#server.ccl.net>
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Date: Tue, 11 Sep 2007 19:02:03 +0400
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Sent to CCL by: chupvl [chupvl^_^gmail.com]
It's not clear what data you have to analyze.
NA sequence or some sort damage value?

Chupakhin Vladimir

Dan T Major majort__mail.biu.ac.il wrote:
> Sent to CCL by: "Dan T Major" [majort^mail.biu.ac.il]
> Hi,
> We have generated tabulated data on the damage caused to nucleic acids (NA) segments (the sequence of which is known) due to exposure to various chemicals.
>  
> We would like to decipher NA damage patterns out of this data. Specifically, we would like to identify short consensus NA sequences interacting specifically with certain chemicals (i.e. which consensus sequence is sensitive to which chemical, and in what typical way is a consensus sequence damaged) based on the experimental data.
>  
> Can you propose a suitable software/methodology for data-mining/clustering?
>
> Many thanks>
>
>
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