Babel
Hello,
Could anyone help me with a babel conversion problem. The problem is
converting 1bna.pdb to 1bna.mol. 1bna is a DNA compound. Another DNA
compound also failed to convert, 1d58.pdb. 1crn.pdb, a protein, had no
problems converting. The number of atoms in the protein is much greater
than the DNA segments.
The commands to convert from a pdb file to a molgen file are
babel -ip c:\netscape\1bna.pdb -omolgen c:\netscape\1bna.mol
The message returned exits the MS-DOS window and says the program was
shut down because it violated system integrity.
The same message appearred after attempting to convert a DNA structure
conversion from .pdb to an ISIS draw file .mol. The conversion input
command was -imdl.
Has anyone else had a similar problem? If so could you please send me
the solution?
Thank you,
Jeff Ayres