RE: CCL: GEOMETRY QUESTION
The problem outlined below was recently proposed to the list for comment:
Given a fragment A-B-C, one wishes to attach a fourth atom, D, with the
available information being:
r(BD)
<(ABD)
<(CBD)
how can one *uniquely* define the coordinates of D??
There is not enough information to define D uniquely. Consider the situation
with the ABC fragment is constrained to the xy-plane:
A
/
D--B
\
C
Unless the angles <(ABC), <(ABD), & <(CBD) sum to 360 deg., ther
will be 2
solutions for the coordinates of D, differing in the algebraic sign for the
z-coordinate. In order to uniquely locate D one needs one additional piece
of information. Two possibilities are:
out-of-plane angle (signed) for the BD bond
dihedral angle A-C-B-D (signed)
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FREDERIC A. VAN-CATLEDGE
Sr. Research Associate
Scientific Computing Division || Office: (302) 695-1187 or 529-2076
Central Research & Development Dept. ||
The DuPont Company || FAX: (302) 695-9658
P. O. Box 80320 ||
Wilmington DE 19880-0320 || Internet: fredvc : at :
esvax.dnet.dupont.com
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