Hi,I am trying to do molecular dynamics on a small molecule. I have been all over the web trying to find the CHARMM-style topology and parameter files for decyloxy methanol (DEM). I was able to find it on the hic-up website (http://xray.bmc.uu.se/hicup/), but the files it generates are without hydrogens. Does anyone know where I might be able to find the topology and parameter files or how I can generate them myself?
Thanks, Scott Stagg