RE: Tool for secondary structure prediction

Another is PSIPRED:
 http://bioinf.cs.ucl.ac.uk/psipred/
 -----Original Message-----
 From: andre mauricio de oliveira [mailto:amolive_at_dedalus.lcc.ufmg.br]
 Sent: Thursday, August 07, 2003 6:50 AM
 To: Thomas Steinbrecher
 Cc: chemistry_at_ccl.net
 Subject: CCL:Tool for secondary structure prediction
 Dear Dr. Steinbrecher,
 (1) Try www.expasy.org.
 (2) VEGA (freeware!) also has an interface w/ PREDICTOR	 suite.
 Both require sequence in FASTA format.
 Greets.
 On Thu, 7 Aug 2003, Thomas Steinbrecher wrote:
 > Dear CCLers,
 >
 > I am looking for a tool to predict secondary structure
 > elements for a protein of known sequence but without
 > 3D-structure. There are no homologues with known structure.
 >
 > Please point me to references for a program (ideally open
 > source/freeware) that can do such a thing.
 >
 > Kind Regards,
 >
 > Thomas Steinbrecher
 >
 >
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 >
 >
 >
 Andre Mauricio de Oliveira
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 Laboratorio de QSAR e Modelagem Molecular
 Nucleo de Estudos em Quimica Medicinal (NEQUIM)
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