Re: CCL:What software will work?



 Dear Professor Boyd:
 
Our software "Molecular Design Suite (MDS)" has facility to obtain conformations of organic molecules using Monte Carlo method with MMFF force field. Please have a look at http://www.vlifesciences.com/ProdVLifeMDS.htm and register for demo license at http://www.vlifesciences.com/RegisterAtVLife.htm
 
MDS is capable of meeting ALL your requirements. I am sending you more details in a separate mail.
 Thank you.
 Sudhir Kulkarni, Ph.D.
 VLife Sciences Technologies Pvt. Ltd.
 At 09:42 PM 11/24/2004, boyd)at(chem.iupui.edu wrote:
 
 CCLers,
 We are seeking recommendations on software that can do ALL the following:
 * run Monte Carlo conformational searches on organic molecules with
 200-300 atoms.
 * use the MMFF force field.
 * select which torsional angles are free to rotate and set their step size.
 * fix some torsional angles.
 * analyze the conformers produced, such as exporting the resulting
 torsional angles and energies to a spreadsheet.
 We have tried SYBYL, MacroModel, Spartan, Cerius2, Quanta, and InsightII.
 In each case, the software was unable to provide a solution.
 Suggestions?
 Thankful for your giving recommendations,
 Don
 Donald B. Boyd, Ph.D.
 Department of Chemistry
 Indiana University-Purdue University at Indianapolis
 E-mail boyd)at(chem.iupui.edu
 -= This is automatically added to each message by the mailing script =-
 To send e-mail to subscribers of CCL put the string CCL: on your Subject: line
 and send your message to:  CHEMISTRY)at(ccl.net
 Send your subscription/unsubscription requests to: CHEMISTRY-REQUEST)at(ccl.net
 HOME Page: http://www.ccl.net
 | Jobs Page: http://www.ccl.net/jobs
 If your mail is bouncing from CCL.NET domain send it to the maintainer:
 Jan Labanowski,  jlabanow)at(nd.edu (read about it on CCL Home Page)
 -+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+
 ---
 [This E-mail scanned for viruses by Declude Virus]
 
 ---
 [This E-mail scanned for viruses by Declude Virus]