Re: CCL:smiles to sdf converter
- From: Ferenc Csizmadia <fcsiz:at:chemaxon.com>
- Subject: Re: CCL:smiles to sdf converter
- Date: Thu, 02 Dec 2004 08:23:17 +0100
Jiri,
Check out MolConverter: http://www.chemaxon.com/marvin/doc/user/molconvert.html
You can generate 2D or even very good quality 3D coordinates to your structures
using this tool.
Examples:
Generating 2D SDF:
molconvert sdf -2 input.smiles >output.sdf
Generating 3D SDF:
molconvert sdf -3 input.smiles >output.sdf
To access MolConverter you need to download the Marvin Beans package (http://www.chemaxon.com/products.html#Marvin), which also
includes a structure editor and a structure viewer.
MolConverter is free if you don't build it into an application.
Best regards,
Ferenc
---------- Forwarded message ----------
Date: Wed, 1 Dec 2004 16:57:00 +0100
From: Jiri Krechl <jiri.krechl:at:spechem.cz>
To: CHEMISTRY:at:ccl.net
Subject: CCL:smiles to sdf converter
I am looking for a smiles to sdf converter able to run on PC/Win. Apparently
Babel might be the solution but the last version I could found for DOS
environment (babel16) does not seem to support smiles among otherwise wide
variety of input/output formats.
Thanks for a hint.
Jiri
e: jiri.krechl:at:spechem.cz
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