W:Evaluating programs of conformational search

From: "Perez, Nueno, Violeta" <vio_de_chocolate ## yahoo.es>
Subject: W:Evaluating programs of conformational search
Date: Wed, 11 May 2005 12:24:45 -0400

I'm doing ab initio loop modeling for a protein whith Congen program and I
 would like to evaluate my results. I have heard about programs like PROCHECK or
 WHATCHECK, what is better? Is there any other program better for this?
 I have another question. Could you tell me a good program for scanning a ligand
 binding site in a protein? I have used Autodock, is there other program more
 interesting for these purpose?
 Thank you very much.
 Violeta Isabel Prez Nueno
 Instituto Qumico de Sarri
 Barcelona
 vio_de_chocolate ## yahoo.es