Re: CCL:Tinker input file 2



 Dear David,
 
Thank you very much for your reply. Actually I tried the way you told me before. I think the most trouble thing is that I have to assign those atomic force field types manually. Is there any automatic way to do this? I am wondering if the molecules are really big, how it can be done in this way? It is really time consuming.
 Best wishes,
 Holly
 On Wed, 11 May 2005, David Santos Carballal wrote:
 
 I forgot:
 You would find the pdbxyz.exe in the bin directory of TINKER, if you run
 it from Windows
 David Santos Carballal
 On Wed, 11 May 2005 lhhu/at/yangtze.hku.hk wrote:
 
 Dear all CCLers,
 I would like to use free TINKER to calculated molecular dynamics. But the
 input file of tinker seems difficult to generate because the int or xyz
 file need to be assigned force field atom type first. Can anyone tell me
 about the most convenient way to generate the input xyz or int file? Is
 there any free program I can use?
 Thank you very much,
 Holly
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