CCL: W:How to calculate the BSSE Correction
- From: Tanja van Mourik <t.vanmourik__ucl.ac.uk>
- Subject: CCL: W:How to calculate the BSSE Correction
- Date: Thu, 13 Oct 2005 14:02:05 +0100 (BST)
Sent to CCL by: Tanja van Mourik [t.vanmourik++ucl.ac.uk]
Hi Faisal,
With Gaussian 03 one can actually simply use the "Counterpoise"
keyword (Massage was used in older versions of Gaussian), see
http://www.gaussian.com/g_ur/k_counterpoise.htm
This also allows one to do counterpoise-corrected geometry
optimisations.
It's really easy to use; you basically just have to specify the
different fragments, see the Gaussian manual.
Hope that helps,
Tanja
--
=================================================================
Tanja van Mourik
Royal Society University Research Fellow
Chemistry Department
University College London phone: +44 (0)20-7679-4663
20 Gordon Street e-mail: work: T.vanMourik%a%ucl.ac.uk
London WC1H 0AJ, UK home: tanja%a%van-mourik.me.uk
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=================================================================
> I am afraid you misunderstood the paper. You should calculate every
> molecule in the basis
> of the whole complex. That means, that for doing the monomer
> calculculation you start
> with the dimer calculation. You make sure that the atoms of the other
> molecule are still there
> (in the geometry of the dimer) but with zero charge; this is called a
> ghost. Of course the number of
> electrons has to be the number of electrons in the monomer you are
> calculating. I think
> the massage keyword in GAUSSIAN can be used to do this, but I do not
> use the program.
> Joop
> On Oct 13, 2005, at 5:36, Faisal Rahman s101alif ~~ mail.chem.itb.ac.id
> wrote:
>
> >
> > Sent to CCL by: "Faisal Rahman" [s101alif ~
mail.chem.itb.ac.id]
> > Hi everybody ...
> >
> > I'am a newbie here ...
> > I'am an undergraduate student of Chemistry Department of Bandung
> > Institute of Technology. I'am doing my Final project, studying
> > hydrogen bond between DNA Bases and HCl using DFT,MP2 and HF method
> > using 6-31++G** basis set, using gaussian 03. I Have a problem with
> > the BSSE correction. I don't know how to calculate it.
> > For example, I get confused to calculate the interaction energy that
> > corrected with BSSE of complex adenine and HCl.So what should i do ...
> > Could anyone tell me ...
> > I ever read an article about BSSE, It tell that the correction of
> > interaction energy can be done by calculate every singel molecule with
> > the basis of other molecule. could anyone give the example of input
> > file of gaussian to calculate the HCl energy on the basis of adenine
> > or to calculate adenine on the basis of HCl?
> > Thank's before ...
> > I would very approciate it
> >
> >
> > Faisal Rahman
> > Chemistry Department of Bandung Institute of Technology> To recover
the email address of the author of the message, please
> > change>
> > -+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-
> > +-+
> >
> >
> >
> =========================================
> Joop van Lenthe
> Theoretical Chemistry Group
> Debye Institute, Utrecht University
> Padualaan 8 3584 CH Utrecht
> -31-30-2532733
> joop!=!chem.uu.nl
> =========================================
>
>
> --Apple-Mail-29-560874604
> Content-Transfer-Encoding: 7bit
> Content-Type: text/enriched;
> charset=US-ASCII
>
> Hi
>
> I am afraid you misunderstood the paper. You should calculate every
> molecule in the basis
>
> of the whole complex. That means, that for doing the monomer
> calculculation you start
>
> with the dimer calculation. You make sure that the atoms of the other
> molecule are still there
>
> (in the geometry of the dimer) but with zero charge; this is called a
> ghost. Of course the number of
>
> electrons has to be the number of electrons in the monomer you are
> calculating. I think
>
> the massage keyword in GAUSSIAN can be used to do this, but I do not
> use the program.
>
> Joop
>
> On Oct 13, 2005, at 5:36, Faisal Rahman s101alif ~~
> mail.chem.itb.ac.id wrote:
>
>
> <excerpt>
>
> Sent to CCL by: "Faisal Rahman" [s101alif ~ mail.chem.itb.ac.id]
>
> Hi everybody ...
>
>
> I'am a newbie here ...
>
> I'am an undergraduate student of Chemistry Department of Bandung
> Institute of Technology. I'am doing my Final project, studying
> hydrogen bond between DNA Bases and HCl using DFT,MP2 and HF method
> using 6-31++G** basis set, using gaussian 03. I Have a problem with
> the BSSE correction. I don't know how to calculate it.
>
> For example, I get confused to calculate the interaction energy that
> corrected with BSSE of complex adenine and HCl.So what should i do ...
> Could anyone tell me ...
>
> I ever read an article about BSSE, It tell that the correction of
> interaction energy can be done by calculate every singel molecule with
> the basis of other molecule. could anyone give the example of input
> file of gaussian to calculate the HCl energy on the basis of adenine
> or to calculate adenine on the basis of HCl?
>
> Thank's before ...
>
> I would very approciate it
>
>
>
> Faisal Rahman
>
> Chemistry Department of Bandung Institute of Technologyhttp://www.ccl.net/cgi-bin/ccl/send_ccl_messagehttp-:-//www.ccl.net/chemistry/sub_unsub.shtmlhttp-:-//www.ccl.net/spammers.txt</excerpt><smaller>=========================================
>
> Joop van Lenthe
>
> Theoretical Chemistry Group
>
> Debye Institute, Utrecht University
>
> Padualaan 8 3584 CH Utrecht
>
> -31-30-2532733
>
> joop!=!chem.uu.nl
>
> =========================================
>
> </smaller>
>
>
> --Apple-Mail-29-560874604-->
>
>
>