CCL:G: .dcd file in charmm?
- From: "Samuel Flores" <samuel.flores()
yale.edu>
- Subject: CCL:G: .dcd file in charmm?
- Date: Wed, 30 Nov 2005 20:11:49 -0500
Sent to CCL by: "Samuel Flores" [samuel.flores..yale.edu]
Hi guys,
I would like to visualize the trajectory generated by charmm. I am told VMD
can do this, but requires a .dcd whereas I have a .cor. Can anyone tell me
how to get charmm to output a .dcd?
Many thanks.
Samuel Flores
Graduate Student
Gerstein Lab
Office:
Bass 437
266 Whitney Avenue
New Haven, CT 06520
203.432.5405
Home:
28 Pearl Street
New Haven, CT 06511
cell: 203.747.2682
-----Original Message-----
> From: owner-chemistry_-_ccl.net [mailto:owner-chemistry_-_ccl.net]
Sent: Wednesday, November 30, 2005 7:33 PM
To: Flores, Samuel
Subject: CCL:G: DNA Z-matrix
Sent to CCL by: "Peter Gannett" [pgannett=-=hsc.wvu.edu]
Sounds like a formidable calculation.
If you have a pdb file you could convert it with babel.
Pete
>>> owner-chemistry(a)ccl.net 11/30 4:46 PM >>>
Sent to CCL by: "Dwayne Joseph" [dwayne_joseph]|[hotmail.com]
Hello,
I am a graduate student in physics at Florida A&M University. I was
told
that i could receive information for GAUSSIAN98 at this email address.
I'm
currently trying to find a DNA protein Z-matrix to use as an input file
for
GAUSSIAN98. Any assistance would be greatly appreciated.
-Dwayne Joseph
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