CCL: comparing database results
- From: Tim Dudgeon <tdudgeon##informaticsmatters.com>
- Subject: CCL: comparing database results
- Date: Tue, 20 Mar 2007 07:40:09 +0000
Sent to CCL by: Tim Dudgeon [tdudgeon[-]informaticsmatters.com]
ChemAxon's Instant JChem can do this, and its free.
You can easily create 2 databases of structures and then analyze them
for "overlap", and then inspect the results.
Overlap can be in terms of identity or similarity.
See:
http://www.chemaxon.com/product/ijc.html
http://www.chemaxon.com/instantjchem/webPages/htmlFiles/overlap_analysis.html
Tim
Iain MacDougall iain.macdougall##studentmail.newcastle.edu.au wrote:
Sent to CCL by: "Iain MacDougall"
[iain.macdougall\a/studentmail.newcastle.edu.au]
I have two sets of compounds from in silico database searching. I have compared
the compounds and have found that none are identical, however I wish to find
similar hits as well. I can do this by eye for small numbers of hits but this
will be impossible for some of my larger hitlists. Does anyone know of freeware
that will do some kind of structural comparison/similarity searching for me?
Thanks for your help!>