CCL: Protein Morpher

[Nathalie Reuter <nathalie.reuter-.-cbu.uib.no>]

 Sent to CCL by: Nathalie Reuter [nathalie.reuter/./cbu.uib.no]
 Hi,
 you can try WEBnma (http://www.bioinfo.no/tools/normalmodes).
If you first upload the open conformation, calculate the approx.
 normal
 modes and then choose the option 'calculate animation of a
 transconformation' at the bottom of the analysis page. You need then to
 upload the second (close) conformation.
I would be pleased to help you do it if you encounter problems with
 our
 website.
 Regards,
 Nathalie
 ---
 Nathalie Reuter
 Computational Biology Unit
 Univ. of Bergen
 Norway
 http://www.cbu.uib.no
 http://www.bioinfo.no
 Alessandro Casoni alessandro.casoni a unimi.it wrote:
>  Sent to CCL by: "Alessandro  Casoni" [alessandro.casoni!A!unimi.it]
> Hi, does anyone know any software (preferably open source) able to do
>  protein morphing? I have a receptor in 2 conformations and I want to build an
>  intermediate conformation.
>  
>  Any help will be appreciated...
>  Alessandro>