CCL: Chemical library analysis tool
- From: Michel Petitjean <petitjean.chiral#,#gmail.com>
- Subject: CCL: Chemical library analysis tool
- Date: Fri, 13 Feb 2009 14:08:20 +0100
Sent to CCL by: Michel Petitjean [petitjean.chiral{}gmail.com]
Hi Sangeetha,
You did not specify if you need to address 2D or 3D libraries.
Anyway, please look at the MCG freeware on my web page:
http://petitjeanmichel.free.fr/itoweb.petitjean.freeware.html
MCG produce clusters on the basis of a dissimilarity array (or from
numerical variables):
you just have to generate these dissimilarities or distances (non
necessarily euclidean)
between compounds, so that it reflects what you need.
The algorithm is O(N^3), N being the number of compounds.
Best regards,
Michel Petitjean,
DSV/iBiTec-S/SB2SM (CNRS URA 2096), CEA Saclay, bat. 528,
91191 Gif-sur-Yvette Cedex, France.
Phone: +331 6908 4006 / Fax: +331 6908 4007
E-mail: michel.petitjean*o*cea.fr, petitjean.chiral*o*gmail.com
http://petitjeanmichel.free.fr/itoweb.petitjean.shape.html
.......................................................................................................................
Sent to CCL by: "Sangeetha Vimal" [srdshigella,gmail.com]
Hi all,
Can someone suggest me a chemical library analysis tool, which can
help in clustering/diversity analysis of chemical compounds in the
database.
Thanks
Sangeetha