CCL: Forcefield parameters transformation - derivation ?



 Sent to CCL by: =?iso-8859-2?Q?Marek_Mal=FD?= [marek.maly===ujep.cz]
 Dear all,
 I would like to simulate carbosilanes and later their complexes with
 organic macromolecules using Amber software.
 
Unfortunately Amber forcefields do not contain proper ff parameters for silicon.
 
In spite of this fact there is still possibility to simulate my Si-based molecules in Amber but I have to find proper parameters (e.g. bond, angle, dihedral) somewhere elsewhere ...
 I need ff parameters for Si in this contexts:
 C-C-C-Si, Si-O-C-C, C-Si-C-H etc.
 So I see here two solutions:
 A)
 
To import relevant parameters from another forcefields like CVFF, PCFF, MM2, MM3 ...
 
Regarding to this point it would be nice to have some routine which could be able to convert one forcefield file XYZ to ff file written in Amber format. If possible not to transform just text formating of the source XYZ ff file with respect of Amber formating, but also to transform properly the parameters values with respect to eventual diferences in units or analytic
 formulas for interatomic forces.
 B)
 
To derive all the necessary parameters using some intelligent (probably quantum mechanics based) software which could be able to do this analysis for small residua provided for example in PDB format. Again would be nice to have this parameters
 in format compatible with Amber ff.
 
I am kindly asking for any (even only partial) information regarding to this topic or just for redirecting to relevant information resources. Of course that I will be grateful not only for info related to some appropriate SW which can help me regarding to A) or B) but I will also appreciate any info based on own experiences, strategies, suggestions, warnings ...
 regarding to this topic.
 Best regards,
    Marek
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