CCL: Environmental Toxicity Challenge -- new deadline is September 10
- From: Jan Labanowski <janl\a/speakeasy.net>
- Subject: CCL: Environmental Toxicity Challenge -- new deadline is
September 10
- Date: Tue, 01 Sep 2009 08:52:18 EDT
Sent to CCL by: Jan Labanowski [janl(-)speakeasy.net]
[I was ask to repost it, Jan]
Environmental Toxicity Challenge
Following requests of participants we extended the submission deadline to
September 10th.
This challenge is co-organized by ICANN'09: International Conference on
Artificial Neural Networks, European Neural Network Society (ENNS) and CADASTER
project.
Goals of this study: Develop in silico models to predict environmental toxicity
of molecules against T. pyriformis using data from [1]. Estimate the prediction
intervals for new compounds. Further information can be found at
http://www.cadaster.eu.
Five datasets of descriptors are available:
Quantum Chemistry, E-state, DRAGON, SimulationsPlus and MOE descriptors
Important key dates
New deadline to submit: September 10
September 14-17 2009 The winner will be announced at the ICANN'09 conference
(there is no requirement to participate to this conference)
The winner will be identified according to the criteria defined below. It is
expected that the winner as well as other participants will submit articles
describing their methodological approaches for publication in a peer-reviewed
journal (under discussion).
Criteria for success
Firstly, methods with Root Mean Squared Error (RMSE) non-significantly
different
to the method with lowest RMSE (according to the bootstrap test, p<0.05)
will be
identified as the first-pass winners.
Secondly, the method providing the best likelihood criteria between estimated
and
observed confidences for the blind test set as described in [2] will be
identified amid the first-pass winners.
Igor V. Tetko, Terry W. Schultz and Wlodzislaw Duch
[1] Zhu, H.; Tropsha, A.; Fourches, D.; Varnek, A.; Papa, E.; Gramatica, P.;
Oberg, T.; Dao, P.; Cherkasov, A.; Tetko, I. V. Combinatorial QSAR Modeling
of Chemical Toxicants Tested against Tetrahymena pyriformis J. Chem. Inf. Model.
2008, 48 (4), 766-784.
[2] Tetko, I. V.; Sushko, I.; Pandey, A. K.; Zhu, H.; Tropsha, A.; Papa, E.;
Oberg, T.; Todeschini, R.; Fourches, D.; Varnek, A., Critical assessment of
QSAR models of environmental toxicity against Tetrahymena pyriformis: focusing
on applicability domain and overfitting by variable selection J.
Chem. Inf. Model. 2008, 48 (9), 1733-46.
Dr. Igor V. Tetko
Institute of Bioinformatics and Systems Biology
Helmholtz Zentrum Muenchen
German Research Center for Environmental Health
Ingolstaedter Landstrasse 1,
D-85764 Neuherberg, Germany
Tel./Fax: +49-89-3187-3575/x85
e-mail: itetko|*|vcclab.org, itetko|*|gmail.com
http://www.vcclab.org
http://www.cadaster.eu --
see prediction challenge!