CCL: Ligand based virtual screening and drug design
- From: "Atul Agarwal"
<aagarwal+/-achillion.com>
- Subject: CCL: Ligand based virtual screening and drug design
- Date: Thu, 17 Sep 2009 08:39:05 -0400
Sent to CCL by: "Atul Agarwal" [aagarwal],[achillion.com]
I used the LASSO (http://www.simbiosys.ca/ehits_lasso/) approach for
ligand based virtual screening in the past year. I think it is an
attractive approach with a novel 2.5 D descriptor combined with very
fast neural network based screening engine.
More information about the method is in the following publication:
D. Reid, B. S. Sadjad, Z. Zsoldos, A. Simon: LASSO - ligand activity by
surface similarity order: a new tool for ligand based virtual screening
Journal of Computer-Aided Molecular Design
http://dx.doi.org/10.1007/s10822-007-9164-5
doi: 10.1007/s10822-007-9164-5
Atul Agarwal
Senior Director, CCI
Achillion Pharmaceuticals, Inc.
300 George Street
New Haven, CT 06511
203-752-5491 (tel)
203-752-5454 (FAX)
aagarwal-x-achillion.com
-----Original Message-----
> From: owner-chemistry+aagarwal==achillion.com-x-ccl.net
[mailto:owner-chemistry+aagarwal==achillion.com-x-ccl.net] On Behalf Of
Werner K werner.schroedinger(-)googlemail.com
Sent: Tuesday, September 15, 2009 9:18 AM
To: Atul Agarwal
Subject: CCL: Ligand based virtual screening and drug design
Sent to CCL by: "Werner K" [werner.schroedinger a googlemail.com]
Hi,
what is in your opinion the best software packages for ligand based
virtual screening and drug design?
Thanks
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