CCL: Svar: CCL: PLS implementation?
- From: "Niels Johan Christensen"
<njc]~[life.ku.dk>
- Subject: CCL: Svar: CCL: PLS implementation?
- Date: Sun, 22 Nov 2009 17:46:13 +0100
Sent to CCL by: "Niels Johan Christensen" [njc=-=life.ku.dk]
Hi Joe,
One option is to implement a PLS algorithm in your favorite programming
language. The NIPALS PLS algorithm is particularly simple to understand and work
with (~10 lines of code in Matlab).
http://www.chemometrics.se/editorial/june2002.html#nipals
Best
Niels
http://www.chemometrics.se/editorial/june2002.html#nipals
>>> "Joe Leonard jleonard42-$-gmail.com" <owner-chemistry
.. ccl.net> 19-11-09 0:01 >>>
Sent to CCL by: Joe Leonard [jleonard42|gmail.com]
Folks, I would appreciate any pointers to PLS implementations that can
handle much larger number of X variables as compared to Y (to-be-fit)
variables. I recall that PLS was used in 3D QSAR applications because
of its stability in such cases, but it seems that individual
implementations differ in how this statement applies to them...
3D QSAR test sets w/ aligned compounds would also be of use - if
people are aware of such collections on-line. But the PLS engine(s)
are my primary search right now...
Thanks in advance!
Joe Leonard
jleonard42]=[gmail.com
--
I have fought a good fight,
I have finished my course,
I have kept the faith.
EFL/11-6-09
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