From owner-chemistry@ccl.net Tue May 18 17:05:00 2010
From: "Venable, Richard (NIH/NHLBI) E venabler||nhlbi.nih.gov" <owner-chemistry^server.ccl.net>
To: CCL
Subject: CCL:G: GAR2PED
Message-Id: <-41888-100518165550-3133-Hwtzp9arFQVv2fPgmL5xAw^server.ccl.net>
X-Original-From: "Venable, Richard (NIH/NHLBI) [E]" <venabler!A!nhlbi.nih.gov>
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Date: Tue, 18 May 2010 16:53:26 -0400
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Sent to CCL by: "Venable, Richard (NIH/NHLBI) [E]" [venabler[#]nhlbi.nih.gov]
A few basic Linux/Unix things to note here--

[1] the ./ prefix is *only* correct when the executable program is in the c=
urrent working directory, so that was probably misleading advice; I suggest=
 removing the ./ prefix

[2] the string "/path/to" must be replaced by the actual full pathname on y=
our system; change to the directory where the program resides, and type the=
 command

pwd

The string returned is the full path, which should replace "/path/to" in th=
e example given.

--
Rick Venable     5635 FL/T906
Membrane Biophysics Section
NIH/NHLBI Lab. of Computational Biology
Bethesda, MD  20892-9314   U.S.A.
(301) 496-1905   venabler AT nhlbi*nih*gov



On 5/18/10 1:26 PM, "Barry Hardy barry.hardy*o*vtxmail.ch" <owner-chemistry=
(_)ccl.net> wrote:

Dear all,
According to your suggestions I add  ./ at the beginning to run GAR2PED. Al=
so I add path "export PATH=3D/path/to/gar2ped\:$PATH". Now it is saying
bash: ./pullarc: No such file or directory.
Is it that GAR2PED is not compatible with the output of the G03W? Do I need=
 to do something in Gaussian to make it compatible.
Please help.
Thanks in advance.
Partha.

--- On Sun, 16/5/10, zborowsk#chemia.uj.edu.pl <owner-chemistry{:}ccl.net> =
wrote:

> From: zborowsk#chemia.uj.edu.pl <owner-chemistry{:}ccl.net>
Subject: CCL: GAR2PED
To: "Kundu, Partha Pratim " <partha1kundu{:}yahoo.com>
Date: Sunday, 16 May, 2010, 2:21 PM


Sent to CCL by: zborowsk^^chemia.uj.edu.pl

>
> Sent to CCL by: "partha  kundu" [partha1kundu+*+yahoo.com]
> Dear all,
> I have installed GAR2PED software in my computer. According to the readme
> file I am typing the command pullarc <filename>. But it is saying  "-bash=
:
> pullarc: command not found". Please suggest me what to do.

in order to execute program in linux/unix you must to add ./ at the beginni=
ng
in your case ./pullarc

And check if the status of the pullarc file is enable executing, if not
change this using the chmod command