CCL:G: PBC with gaussian
- From: "Ol Ga" <eurisco1__pochta.ru>
- Subject: CCL:G: PBC with gaussian
- Date: Thu, 10 Jun 2010 13:39:52 -0400
Sent to CCL by: "Ol Ga" [eurisco1-x-pochta.ru]
Dear Upakarasamy Lourderaj,
You can study periodic adsorption - optimize structures and find TS with QST2
(QST3) methods.
Also You can study adsorption on a cluster (a molecular approach), I.e. without
PBC conditions.
An example for PBC calculations (one from gaussian example files) :
#p lsda/sto-3g force geom=modred pbc=gammaonly
2d PBC, also test for addredundant with PBC C(H)NC(CN)C(H) - chain (C-N-C-N-
core)
0,1
B 0.7260460000 -0.6287740000 0.0000000000
N -0.7260460000 -0.6287740000 0.0000000000
N 1.4520920000 0.6287740000 0.0000000000
B -1.4520920000 0.6287740000 0.0000000000
B 0.7260460000 1.8863230000 0.0000000000
N -0.7260460000 1.8863230000 0.0000000000
N 1.4520920000 3.1438710000 0.0000000000
B -1.4520920000 3.1438710000 0.0000000000
Tv 4.3562760000 0.0000000000 0.0000000000
Tv 0.0000000000 5.0301940000 0.0000000000
11 1 21 F
* * * F
* * * * F
If you are planning to study adsorption on a metallic surface, I think it will
be really difficult with Gaussian.
Sincerely,
Ol Ga
PS: Possible you will need to play with IOPs to reduce time of calculations.
--------------------------------------------------
> From: "Upakarasamy Lourderaj u.lourderaj^-^gmail.com"
<owner-chemistry||ccl.net>
Sent: Thursday, June 10, 2010 4:01 PM
To: "Ga, Ol " <eurisco1||pochta.ru>
Subject: CCL:G: PBC with gaussian
>
>
> Sent to CCL by: "Upakarasamy Lourderaj"
[u.lourderaj!^!gmail.com]
> I am studying interaction of organic molecules on surfaces. I would
appreciate very much if you let me guide through as to how to give input for
such calculations. I want to use periodic boundary condition(PBC) for the
surface only, while the organic molecule should treated as a single molecule.
Can we do such calculations using g03?
>
>