CCL:G: Ring pseudorotation
- From: "Dillen, Jan <jlmd- -sun.ac.za>" <JLMD-
-sun.ac.za>
- Subject: CCL:G: Ring pseudorotation
- Date: Mon, 12 Mar 2012 08:11:52 +0200
Hallo Alcides
Unfortunately, there is no "auto" way, and
magic is an illusion, at least so I am told.
I would either generate starting conformations using
Cremer and Pople's formula for the deviation from the mean ring plane, or the
empirical formula for
the torsion angles by Geise and Altona. After that, you are at the mercy of the
Gaussian minimiser.
However, I have found the latter to be very efficient
in going to transition states. If you are interested in energy profiles of the
pseudorotation, do
IRCs once you have the energy maxima. Your energy surface will probably be very
flat, so Gaussian may (will) have troubles with the (automatic) IRCs.
You propably will have to distort the transition state in the
direction of the proper eigenvector and do a
downhill IRC, and even that is not guaranteed to work.
May the force be with you.
Jan
Hello all!
I'm trying to study a pseudorotation of a substituted pyrrolidine ring
using GAUSSIAN 03. Although literature exists on the theme, I haven't come
across any input example of it,so I'm trying to compute it in a way that I
dislike particulary, which is to
set a plane made of four atoms, and set one of the atoms off-plane, which is
quite unrealistic. I would ask if anyone could kindly tell me what is your way
of computing pseudorotation, and if you happen to have an 'automagic' way of
doing so, if you would
be so kind as to share it.
Best,
Alcides
E-pos vrywaringsklousule
Hierdie e-pos mag vertroulike inligting bevat en mag regtens geprivilegeerd wees
en is slegs bedoel vir die persoon aan wie dit geadresseer is. Indien u nie die
bedoelde ontvanger is nie, word u hiermee in kennis gestel dat u hierdie
dokument geensins mag gebruik,
versprei of kopieer nie. Stel ook asseblief die sender onmiddellik per telefoon
in kennis en vee die e-pos uit. Die Universiteit aanvaar nie aanspreeklikheid
vir enige skade, verlies of uitgawe wat voortspruit uit hierdie e-pos en/of die
oopmaak van enige
lêers aangeheg by hierdie e-pos nie.
E-mail disclaimer
This e-mail may contain confidential information and may be legally privileged
and is intended only for the person to whom it is addressed. If you are not the
intended recipient, you are notified that you may not use, distribute or copy
this document in any
manner whatsoever. Kindly also notify the sender immediately by telephone, and
delete the e-mail. The University does not accept liability for any damage, loss
or expense arising from this e-mail and/or accessing any files attached to this
e-mail.