CCL:G: Opt with Full point group Symmetry in G09
- From: "Mr Mi Yang" <agri_chemist%yahoo.com>
- Subject: CCL:G: Opt with Full point group Symmetry in G09
- Date: Wed, 28 Mar 2012 02:18:44 -0400
Sent to CCL by: "Mr Mi Yang" [agri_chemist\a/yahoo.com]
First of all thanks for replies of Jimenez Vazquez, Cory Pye and others.
Actually, I have used Z-matrix made by molden and it works perfect to maintain
symmetry in G09 only
for small molecules like benzene. But for a Fulleren like molecule to build
Z-matrix manually is almost
impossible.
Is there any software which can help to build Z-matrix for 3 dimensional
fulleren like big molecule by
using some dummy atoms so that it can maintain symmetry in G09 opt...?
I observed below mentioned problem in most of molecules with DnD or DnH
symmetries where G09
try to maintain largest Abelian group instead of full point group.
I have not included any diffused function in basis set but will check a bigger
set without diffused
function.
regards,
Mr.MiYang
> "Hugo Alejandro Jimenez Vazquez hjimenez],[woodward.encb.ipn.mx"
wrote:
>
> Sent to CCL by: Hugo Alejandro Jimenez Vazquez
[hjimenez,+,woodward.encb.ipn.mx]
>
> Although MiYang does not mention it, I would guess that he is using
> diffuse functions in the basis set employed in his (her?) calculations.
> I am also trying to do calculations on fullerenes, and I have found that
> the inclusion of diffuse functions breaks the symmetry of the wavefunction
> with respect to the symmetry of the molecule under analysis. Gaussian says
> that "the density has only Abelian symmetry" and in an
optimization the
> point group of the molecule changes to that of the density with the
> corresponding increase in computational cost. I have not found a way to
> solve this problem other than getting rid of the diffuse functions from
> the basis set, although I am still looking. I asked for advise from
> Gaussian, but they could not help me. The problem is not particular to
> Gaussian 09; previous versions of Gaussian also exhibit the same behavior.
>
> Another solution would be to use a larger basis set withouth the use of
> diffuse functions. I have not tried Cory's suggestion though, but I
> believe that the outcome would be the same.
>
> Regards,
>
>
> --
> ---
> Hugo A. Jimenez Vazquez
> hjimenez###woodward.encb.ipn.mx
> Departamento de Quimica Organica
> ENCB-IPN
> Mexico
>
>
>
> On Tue, 27 Mar 2012, Cory Pye cpye : ap.smu.ca wrote:
>
> >
> > Sent to CCL by: Cory Pye [cpye|,|ap.smu.ca]
> > Hello Mi,
> >
> > I recommend the use of opt=z-matrix and a very carefully constructed
z-matrix.
> >
> > -Cory Pye
> >
> > On Sun, 25 Mar 2012, Mi Yang agri_chemist%x%yahoo.com wrote:
> >
> > >
> > > Sent to CCL by: "Mi Yang" [agri_chemist++yahoo.com]
> > > Dear CCL Colleagues,
> > > I am desperately trying to optimized a C 40 fulleren molecules
with D5d symmetry. But after my
> > > several calculations with different coordinates it reduces the
symmetry C2H in final geometry. I
> > > checked CCL archives and used some helpful keywords like
symm=loose and iop(2/17=xx),
> > > iop(2/18=xx) upto 1 etc.
> > >
> > > Do Gaussian has ability to optimized only some systems in their
Largest Abelian subgroup
instead of
> > > full point group...?
> > > In my comparison of systems same point group is necessary so how
can I optimized the above
Fulleren
> > > 40 (D5d) system in G09...?
> > > Any comment or recommendation will be highly appreciating.....
> > >
> > > MiYang>
> > >
> >
> > ************* ! Dr. Cory C. Pye
> > ***************** ! Associate Professor
> > *** ** ** ** ! Theoretical and Computational Chemistry
> > ** * **** ! Department of Chemistry, Saint Mary's
University
> > ** * * ! 923 Robie Street, Halifax, NS B3H 3C3
> > ** * * ! cpye]^[crux.stmarys.ca http://apwww.stmarys.ca/~cpye
> > *** * * ** ! Ph: (902)-420-5654 FAX:(902)-496-8104
> > ***************** !
> > ************* ! Les Hartree-Focks (Apologies to Montreal
Canadien Fans)
> >
>
>