CCL: Why Chlorine atom is more hydrophobic than Hydrogen



 Sent to CCL by: Andreas Klamt [klamt%%cosmologic.de]
 Hi Mannan,
 
this can be quite nicely explained within COSMO-RS theory. Basically the interactions in liquids are surface contacts. Hydrophobicity is sloppy expression for the fact that water does not like to make contayts to non- or slightly polar surface area. By the way, this is an entropic effect, because the really polar parts of water essentially will make no contacts to slightly polar surfaces, and the free high free energy of contact results from the entropy loss which goes along with placing the few "green" (in COMSO-RS the non-polar surface is colored in green) surface pieces of water on the non-polar solute surface area.
 
Anyway, the larger the non-polar surface area, the more of the green water patches are required as contact partners and the higher the "hydrophobic" costs. And since the vdW-radius of hydrogen is ~ 1.1 Angstrom, and that of Chlorine is ~ 1.7, the exposed non-polar surface area of chlorine is much larger than that of hydrogen.
 Best regards
 Andreas
 Am 23.01.2013 15:36, schrieb Mannan K malie_03(0)yahoo.co.in:
 
 Sent to CCL by: "Mannan  K" [malie_03|*|yahoo.co.in]
 Hi CCLers,
 Chlorine/Fluorine atoms are commonly used to influence the hydrophobic contact
 in small molecule design.
 But how the hydrophobicity is being measured for halogen atoms with reference to
 Hydrogen atom?
 How Molar refractivity and steric paramemters are connected to hydrophobicity of
 an atom?
 Thanks in Advance,
 Mannan>
 
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