CCL:G: How to consider charge on particular atom -lithium
- From: "N. Sukumar" <nagams\a/rpi.edu>
- Subject: CCL:G: How to consider charge on particular atom
-lithium
- Date: Wed, 12 Feb 2014 16:34:19 -0500
Sent to CCL by: "N. Sukumar" [nagams]=[rpi.edu]
"why are Bader charges thought to be so bad and unacceptable?"
Bader charges are thought to be so "bad and unacceptable" because
people
are so used to thinking in terms of point charges or classical
ball-and-stick type spherical "atoms". Bader's atoms-in-molecules are,
in
general, very far from spherical. Thus the electron population in an AIM
or the atomic monopole moment (nuclear charge minus the electron
population) will not, on its own, reproduce the electrostatic potential
or any other physical property. However with inclusion of higher
multipole moments the Bader atoms DO reproduce the electrostatic
potentials and other physical effects.
Whitehead, et al ?Transferable Atom Equivalent Multi-Centered Multipole
Expansion Method? J. Comp. Chem. 24, 512-529 (2003)
N. Sukumar
Professor of Chemistry
Shiv Nadar University, India
----------------------------
"Pursue something so important that even if you fail, the world is better
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==============Original message text===============
On Tue, 11 Feb 2014 15:49:29 EST "Salter-Duke, Brian James
brian.james.duke##gmail.com" wrote:
Sent to CCL by: "Salter-Duke, Brian James "
[brian.james.duke-x-gmail.com]
I do not want to address how the various methods work in practice, as I
do not have the experience. I do however want to make a general point
and then ask a question.
Mulliken charges are not basis set independent as they depend on the
basis functions we happen to use on each atom. As another poster
commented, if we use a one centre complete basis the method puts all the
charge on that atom. Long ago there was a set of one-centre expansion
calculations on simple systems such as methane. There are no basis
functions on the hydrogen atoms. The Mulliken charges are C(4-) and
H(+). If we used basis functions centered only on the H atoms we would
get C(4+) and H(-). Mulliken charges do not have a basis set limit. Too
often we use methods to interpret wave functions that do not have a
basis set limit. I suggest we stop doing that and use methods that do,
just as we have energies that do. We often extrapolate to that energy
limit and we should extrapolate to limits for other properties, even
when they are not observable properties such as charges.
As others have shown many other methods can reduce the sensitivity of
NPA charges to basis-set, but they still do not properly have a basis
set limit.
Bader charges depend on the basis set only in the sense that the density
depends on the basis set. They do have a proper basis set limit. They
are obtained by defining the boundaries of each atom and then
integrating over the atoms. The AIM method of getting those boundaries
seems soundly based. Nobody, I think, has come up with a better method.
So why are Bader charges thought to be so bad and unacceptable. Has that
question been properly considered and analysed?
Brian Duke.
On Tue, Feb 11, 2014 at 10:09:02AM -0500, Tian Lu sobereva-x-sina.com wrote:
>
> Sent to CCL by: "Tian Lu" [sobereva/./sina.com]
> Hi,
>
> AFAIK, there is only one public program can realize Hirshfeld-I, namely
HiPart (http://molmod.ugent.be/software/).
> Another modified Hirshfeld-based method alternative to Hirshfeld-I is
> atomic dipole moment corrected Hirshfeld (ADCH) population method,
> which is the one I highly recommend, see J. Theor. Comp. Chem., 2012,
> 11: 163-183. ADCH charges have much better reproducibility for
> electrostatic potential than Hirshfeld charges, and the molecular
> dipole moment can be even exactly reproduced. ADCH has been
> implemented in Multiwfn program (http://Multiwfn.codeplex.com, see> Section 4.7.2 of its
manual for example).
> NPA charges (also known as NBO charges) are also nice choice. In fact
> they are not explicitly dependent on but only indirectly dependent on
> the basis-set, because the original basis functions will be first
> transformed to natural atomic orbitals before performing natural
> population analysis, this step conspicuously reduces the sensitivity
> of NPA charges to basis-set. According to my experiences, the relative
> sensitivity to basis-set is Mulliken>=Lowdin>>NPAAIMcharges by
fitting
> ESP (MK,CHELPG,etc.) >= HirshfeldADCH.
> Personally I don't recommend using AIM charges, since calculating AIM
> charges is usually time-consuming, and their reproducibility for
> observable quantities are quite poor.
> A comprehensive comparison of atomic charges can be found in Acta
> Phys.-Chim. Sinica, 2011, 28: 1-18
> (http://www.whxb.pku.edu.cn/EN/abstract/abstract27818.shtml)
>
> Tian Lu
>
>
>
>
> ----- Original Message -----
> > From: "Susi Lehtola susi.lehtola]![alumni.helsinki.fi"
<owner-chemistry+/-ccl.net>
> To: "Lu, Tian " <sobereva+/-sina.com>
> Subject: CCL:G: How to consider charge on particular atom -lithium
> Date: 2014-02-11 17:12
>
>
>
> Sent to CCL by: Susi Lehtola [susi.lehtola-.-alumni.helsinki.fi]
> On Mon, 10 Feb 2014 18:37:44 -0500
> "Jim Kress ccl_nospam_._kressworks.com"
<owner-chemistry%a%ccl.net> wrote:
> > Sent to CCL by: "Jim Kress" [ccl_nospam,kressworks.com]
> > AIM and NBO charges would be the best choice. Mulliken and Lowdin are
far too basis set dependent.
> NBO charges are explicitly dependent on the basis set, like Mulliken
> and Lwdin.
> AIM charges are not, but then again according to them e.g. H2O and HCN
> are ionic...
> Probably the best scheme is something like the recently proposed
> iterative Hirshfeld schemes, but I'm not aware of any program that
> implements these.
> Another possibility are electrostatic potential charges, which are
> available in e.g. Gaussian.
> --
> ---------------------------------------------------------------
> Mr. Susi Lehtola, PhD Research Associate
> susi.lehtola%a%alumni.helsinki.fi Department of Applied Physics
> http://www.helsinki.fi/~jzlehtol Aalto University>
Finland
> ---------------------------------------------------------------
> Susi Lehtola, FT Tutkijatohtori
> susi.lehtola%a%alumni.helsinki.fi Fysiikan laitos
> http://www.helsinki.fi/~jzlehtol Aalto-yliopisto>
--
Brian Salter-Duke (Brian Duke) Brian.Salter-Duke|monash.edu
Adjunct Associate Professor
Monash Institute of Pharmaceutical Sciences
Monash University Parkville Campus, VIC 3052, Australiahttp://www.ccl.net/cgi-bin/ccl/send_ccl_messagehttp-:-//www.ccl.net/chemistry/sub_unsub.shtmlhttp-:-//www.ccl.net/spammers.txt===========End
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