CCL: Workshop on Computational Biophysics (Berkeley, Aug 3-7, 2015)
- From: Billy McCann <thebillywayne{}gmail.com>
- Subject: CCL: Workshop on Computational Biophysics (Berkeley, Aug
3-7, 2015)
- Date: Wed, 20 May 2015 14:44:38 -0400
Sent to CCL by: Billy McCann [thebillywayne[A]gmail.com]
Hello.
This looks like a very exciting opportunity.
If you would indulge me, I have a few words.
One item in particular about this workshop is somewhat unfortunate for
me, that is, the laptop hardware requirements.
The workshop requires participants to bring their own laptop. This is
understandable. The hardware requirements for the laptop requires a
discrete GPU. This also is understandable. However, such laptops do
not come cheaply.
I grant that the specifications listed represent technology that is
more than a decade old. Perhaps an older, inexpensive laptop with
these specs or better could be bought from ebay or craigslist? These
sites are patronized for technology with "caveat emptor" writ large.
This requirement alone keeps me from even applying.
I, like many other chemists at the beginning of their scientific
careers, am competing with an ever increasing number of colleagues for
very few available positions and grant money that shrinks year by
year. Some of us simply won't make it. Fact. You are holding this
workshop in August, a time approximately when some of us are facing
the end of our contracts and whose future employment is still dubious.
The acquisition of laptops with a discrete GPU (sometimes referred to
as "gaming laptops") will probably take priority far below the
securing of food, shelter, clothing, and medicine.
I apologize for the rant. But certain aspects of remaining competitive
in computational chemistry simply strike an all-too-sensitive nerve
for me. Perhaps I'm over reacting. Perhaps it's that I'm frustrated
at the state of job seeking in chemistry. Perhaps I'm frustrated
because of the frequency at which I'm advertised such workshops,
workshops that I would love to attend and that I know would help me
progress towards my long-term scientific goals (yours in particular
does), but the limiting reagent in the reaction is money. Always
money.
This ends my words. I may be alone in the sentiments that I've
expressed here. But I have a hunch that I'm not alone.
For your consideration,
Billy Wayne McCann, Ph.D.
--
Billy Wayne McCann, Ph.D.
irc://irc.freenode.net:bwayne
Plays, farces, spectacles, gladiators, strange beasts, medals,
pictures, and other such opiates, these were for ancient peoples the
bait toward slavery, the price of their liberty, the instruments of
tyranny. By these practices and enticements the ancient dictators so
successfully lulled their subjects under the yoke, that the stupefied
peoples, fascinated by the pastimes and vain pleasures flashed before
their eyes, learned subservience as naively, but not so creditably, as
little children learn to read by looking at bright picture books.
Roman tyrants invented a further refinement. They often provided the
city wards with feasts to cajole the rabble, always more readily
tempted by the pleasure of eating than by anything else. The most
intelligent and understanding amongst them would not have quit his
soup bowl to recover the liberty of the Republic of Plato. Tyrants
would distribute largess, a bushel of wheat, a gallon of wine, and a
sesterce: and then everybody would shamelessly cry, 'Long live the
King!' The fools did not realize that they were merely recovering a
portion of their own property, and that their ruler could not have
given them what they were receiving without having first taken it from
them.
~Juvenal
On Tue, May 19, 2015 at 11:54 PM, Lela Vukovic Lvukov1/aillinois.edu
<owner-chemistry ~ ccl.net> wrote:
>
> Sent to CCL by: "Lela Vukovic" [Lvukov1(~)illinois.edu]
> The Theoretical and Computational Biophysics Group, NIH Resource for
> Macromolecular Modeling and Bioinformatics (www.ks.uiuc.edu) at the
> University of Illinois at Urbana-Champaign (www.uiuc.edu), announces a
>
> "Hands-On" Workshop on Computational Biophysics
>
> http://www.ks.uiuc.edu/Training/Workshop/Berkeley2015/
>
> to be held August 3-7, 2015 at the University of California Berkeley.
Application, selection, and
> notification of participants is on-going through July 15, 2015.
>
> The workshop will explore physical models and computational approaches used
for the
> simulation of biological systems and the investigation of their function at
an atomic level. The
> course will be based on case studies, and will cover the following topics:
using the biophysics
> software VMD and NAMD, applications of VMD and NAMD in modern research,
force fields
> and parameterizing new molecules, modeling nucleic acid systems,
computational nano-bio,
> molecular dynamics flexible fitting of structures into cryo electron
microscopy maps, and
> refinement of low resolution crystal structures. Relevant physical
concepts, mathematical
> techniques, and computational methods will be introduced.
>
> The workshop is designed for graduate students and postdoctoral researchers
in
> computational and/or biophysical fields who seek to extend their research
skills to include
> computational and theoretical expertise, as well as other researchers
interested in theoretical
> and computational biophysics. Theory sessions in the morning will be
followed by hands-on
> computer labs in the afternoon in which students will be able to set up and
run simulations.
> Enrollment limited to 24 participants. The workshop will be held August
3-7, 2015. All
> participants are required to bring their own laptop, prepared for use in
workshop tutorial
> sessions. Course materials will be provided.
>
> The workshop is sponsored by the National Institute of General Medical
Sciences
> (www.nigms.nih.gov) and the NIH Center for Macromolecular Modeling and
Bioinformatics.
>
> We look forward to receiving your application!
>
> TCBG Workshop Organizers
> Email: workshop+berkeley2015^-^ks.uiuc.edu>
>