CCL Home Page
Up Directory CCL README
                         How to get started
                         ------------------
To get more information about the installation read the documentation
in man/viewmol.html or man/viewmol.pdf. Precompiled binaries can be found
as additional tgz-files at the same place where this file has been found.
Binaries are available for a number of operating systems. For Linux
there are binaries linked with shared libraries as well as binaries
where Motif has been statically linked. These binary distributions should
be unpacked from the same directory this file was unpacked. They will
then install the binaries in viewmol-2.2.1/source/ where 
is the name of your OS (the output of the uname -s command) and a possible
extension specifying your CPU. If you are using a different, but binary
compatible CPU (e.g. MIPS R8000 or R10000 instead of R5000) please rename
the directory accordingly - otherwise Viewmol will not be able to find
some of its input filters. Directory naming scheme:

OS name           CPU type          Name of directory for binaries
(uname -s)        (hinv on IRIX)
--------------------------------------------------------------------------------
Linux             all               Linux
FreeBSD           all               FreeBSD
AIX               RS1, PowerPC      AIX_POWER
                  RS2 (390, 590)    AIX_POWER2
IRIX              R3000             IRIX_R3000
                  R4000             IRIX_R4000
                  R4400             IRIX_R4400
                  R4600             IRIX_R4600
                  R5000             IRIX_R5000
                  R8000             IRIX64_R8000
                  R10000            IRIX64_R10000
OSF1              all               OSF1
HP-UX             all               HP-UX
SunOS             all               SunOS

In addition to the tgz files there is also a rpm file for RedHat Linux at
the same location where this file was found. The rpm file contains all
the files necessary to use Viewmol.

A directory with examples of all file formats Viewmol is able to read is
included. After installing the program you can change into any of the
directories under examples (e. g. examples/gaussian) and call viewmol
without parameters. You will get a file selection dialog where you can
select a file name (e. g. h2o.log) and after you click OK you should get
a molecule drawing if all is correct.

This file contains a list of all files belonging to the Viewmol program.
Further distribution of Viewmol is only permitted if all these files are
distributed.

Jörg-Rüdiger Hill (jrh@qc.ag-berlin.mpg.de)

List of files:
-rw-r--r--   1 jrh      users       17440 May 31 18:30 README
-rw-r--r--   1 jrh      users       29726 May 28 15:01 Xdefaults.english
-rw-r--r--   1 jrh      users       30965 May 28 15:01 Xdefaults.french
-rw-r--r--   1 jrh      users       30948 May 28 15:01 Xdefaults.german
-rw-r--r--   1 jrh      users       34487 May 28 15:01 Xdefaults.russian
drwxr-xr-x   2 jrh      users        1024 May 28 15:01 babel
drwxr-xr-x   9 jrh      users        1024 May 28 15:01 examples
drwxr-xr-x   5 jrh      users        1024 May 31 18:13 kde
drwxr-xr-x   3 jrh      users        1024 May 28 15:01 man
-rwxr-xr-x   1 jrh      users       12562 May 28 15:01 readdmol
-rwxr-xr-x   1 jrh      users        6892 May 28 15:01 readgulp
drwxr-xr-x   2 jrh      users        2048 May 31 18:30 source
-rw-r--r--   1 jrh      users        6605 May 28 15:01 viewmolrc
-rwxr-xr-x   1 jrh      users        2130 May 28 15:01 writecar
-rwxr-xr-x   1 jrh      users        1996 May 28 15:01 writemol
-rwxr-xr-x   1 jrh      users        1296 May 28 15:01 writetm

babel:
-rw-r--r--   1 jrh      users        5011 May 28 15:01 Makefile
-rw-r--r--   1 jrh      users         687 May 28 15:01 README
-rw-r--r--   1 jrh      users       31764 May 28 15:01 babel.h
-rw-r--r--   1 jrh      users        6449 May 28 15:01 bblmast.h
-rw-r--r--   1 jrh      users        8369 May 28 15:01 bbltyp.h
-rw-r--r--   1 jrh      users        2377 May 28 15:01 rdvm.c
-rw-r--r--   1 jrh      users         941 May 28 15:01 wrvm.c

examples:
drwxr-xr-x   2 jrh      users        1024 May 28 15:01 discover
drwxr-xr-x   2 jrh      users        1024 May 28 15:01 dmol
drwxr-xr-x   2 jrh      users        1024 May 28 15:01 gaussian
drwxr-xr-x   2 jrh      users        1024 May 28 15:01 gulp
drwxr-xr-x   2 jrh      users        1024 May 28 15:01 mopac
drwxr-xr-x   2 jrh      users        1024 May 28 15:01 pdb
drwxr-xr-x   2 jrh      users        1024 May 28 15:01 turbomole

examples/discover:
-rw-r--r--   1 jrh      users        1322 May 28 15:01 benzene.cor
-rw-r--r--   1 jrh      users       32633 May 28 15:01 benzene.hessian

examples/dmol:
-rw-r--r--   1 jrh      users      128485 May 28 15:01 GaAs.outmol

examples/gaussian:
-rw-r--r--   1 jrh      users       54589 May 28 15:01 h2o.log
-rw-r--r--   1 jrh      users       61407 May 28 15:01 methanol.log
-rw-r--r--   1 jrh      users      107751 May 28 15:01 mmdc1.log

examples/gulp:
-rw-r--r--   1 jrh      users       88817 May 28 15:01 urea.out

examples/mopac:
-rw-r--r--   1 jrh      users       51788 May 28 15:01 adamantane.gpt
-rw-r--r--   1 jrh      users      236053 May 28 15:01 adamantane.out

examples/pdb:
-rw-r--r--   1 jrh      users       46851 May 28 15:01 fau1.pdb
-rw-r--r--   1 jrh      users       11778 May 28 15:01 gpc.pdb
-rw-r--r--   1 jrh      users        2374 May 28 15:01 octa.pdb

examples/turbomole:
-rw-r--r--   1 jrh      users         535 May 28 15:01 basis
-rw-r--r--   1 jrh      users       95363 May 28 15:01 control
-rw-r--r--   1 jrh      users        4501 May 28 15:01 coord
-rw-r--r--   1 jrh      users       28481 May 28 15:01 mo12

kde:
-rw-r--r--   1 jrh      users         247 May 28 15:01 README
drwxr-xr-x   3 jrh      users        1024 May 28 15:01 applnk
drwxr-xr-x   2 jrh      users        1024 May 28 15:01 icons
-rwxr-xr-x   1 jrh      users        1577 May 31 18:13 install
drwxr-xr-x   3 jrh      users        1024 May 31 18:20 mimelnk

kde/applnk:
drwxr-xr-x   2 jrh      users        1024 May 28 15:01 Applications

kde/applnk/Applications:
-rw-r--r--   1 jrh      users         404 May 28 15:01 viewmol.kdelnk

kde/icons:
-rw-r--r--   1 jrh      users        1580 May 28 15:01 gulp.xpm
-rw-r--r--   1 jrh      users        1243 May 28 15:01 molecule.xpm
-rw-r--r--   1 jrh      users        1594 May 28 15:01 pdb.xpm
-rw-r--r--   1 jrh      users        7354 May 28 15:01 qc.xpm
-rw-r--r--   1 jrh      users        7269 May 28 15:01 viewmol.xpm

kde/mimelnk:
drwxr-xr-x   2 jrh      users        1024 May 31 16:32 chemical
-rw-r--r--   1 jrh      users        1622 May 31 18:20 magic

kde/mimelnk/chemical:
-rw-r--r--   1 jrh      users         200 May 28 15:01 x-dmol.kdelnk
-rw-r--r--   1 jrh      users         201 May 28 15:01 x-gaussian-output.kdelnk
-rw-r--r--   1 jrh      users         184 May 28 15:01 x-gulp.kdelnk
-rw-r--r--   1 jrh      users         201 May 28 15:01 x-mopac.kdelnk
-rw-r--r--   1 jrh      users         193 May 28 15:01 x-msi-car.kdelnk
-rw-r--r--   1 jrh      users         162 May 28 15:01 x-msi-hessian.kdelnk
-rw-r--r--   1 jrh      users         165 May 28 15:01 x-msi-mdf.kdelnk
-rw-r--r--   1 jrh      users         160 May 28 15:01 x-msi-msi.kdelnk
-rw-r--r--   1 jrh      users         165 May 28 15:01 x-pdb.kdelnk
-rw-r--r--   1 jrh      users         171 May 28 15:01 x-turbomole-basis.kdelnk
-rw-r--r--   1 jrh      users         206 May 28 15:01 x-turbomole-control.kdelnk
-rw-r--r--   1 jrh      users         211 May 28 15:01 x-turbomole-coord.kdelnk
-rw-r--r--   1 jrh      users         170 May 28 15:01 x-turbomole-grad.kdelnk
-rw-r--r--   1 jrh      users         184 May 28 15:01 x-turbomole-scfmo.kdelnk
-rw-r--r--   1 jrh      users         191 May 28 15:01 x-turbomole-vibrational.kdelnk

man:
drwxr-xr-x   2 jrh      users        2048 May 28 15:01 html
-rw-r--r--   1 jrh      users        1711 May 28 15:01 viewmol.html
-rw-r--r--   1 jrh      users      214895 May 28 15:01 viewmol.pdf

man/html:
-rw-r--r--   1 jrh      users        3823 May 28 15:01 bondform.gif
-rw-r--r--   1 jrh      users        2488 May 28 15:01 cellform.gif
-rw-r--r--   1 jrh      users        3922 May 28 15:01 coloreditor.gif
-rw-r--r--   1 jrh      users        4546 May 28 15:01 configurationform.gif
-rw-r--r--   1 jrh      users        5977 May 28 15:01 content.html
-rw-r--r--   1 jrh      users          78 May 28 15:01 cross_ref_motif.gif
-rw-r--r--   1 jrh      users         115 May 28 15:01 downarrow.gif
-rw-r--r--   1 jrh      users        2569 May 28 15:01 error.gif
-rw-r--r--   1 jrh      users          87 May 28 15:01 foot_motif.gif
-rw-r--r--   1 jrh      users        2509 May 28 15:01 footnode.html
-rw-r--r--   1 jrh      users        1996 May 28 15:01 historyform.gif
-rw-r--r--   1 jrh      users        1044 May 28 15:01 img12.gif
-rw-r--r--   1 jrh      users         112 May 28 15:01 leftarrow.gif
-rw-r--r--   1 jrh      users        5590 May 28 15:01 modesform.gif
-rw-r--r--   1 jrh      users        2458 May 28 15:01 moform.gif
-rw-r--r--   1 jrh      users        6568 May 28 15:01 mouse.gif
-rw-r--r--   1 jrh      users         835 May 28 15:01 newman.gif
-rw-r--r--   1 jrh      users         172 May 28 15:01 next_motif.gif
-rw-r--r--   1 jrh      users         991 May 28 15:01 node0.html
-rw-r--r--   1 jrh      users        3671 May 28 15:01 node1.html
-rw-r--r--   1 jrh      users        4421 May 28 15:01 node10.html
-rw-r--r--   1 jrh      users        5269 May 28 15:01 node11.html
-rw-r--r--   1 jrh      users        1983 May 28 15:01 node12.html
-rw-r--r--   1 jrh      users        2449 May 28 15:01 node13.html
-rw-r--r--   1 jrh      users        5775 May 28 15:01 node14.html
-rw-r--r--   1 jrh      users        4352 May 28 15:01 node15.html
-rw-r--r--   1 jrh      users        2768 May 28 15:01 node16.html
-rw-r--r--   1 jrh      users        3464 May 28 15:01 node17.html
-rw-r--r--   1 jrh      users        3092 May 28 15:01 node18.html
-rw-r--r--   1 jrh      users       16059 May 28 15:01 node19.html
-rw-r--r--   1 jrh      users        4160 May 28 15:01 node2.html
-rw-r--r--   1 jrh      users       10952 May 28 15:01 node20.html
-rw-r--r--   1 jrh      users        2832 May 28 15:01 node21.html
-rw-r--r--   1 jrh      users        2844 May 28 15:01 node22.html
-rw-r--r--   1 jrh      users        5037 May 28 15:01 node23.html
-rw-r--r--   1 jrh      users        4602 May 28 15:01 node24.html
-rw-r--r--   1 jrh      users        1548 May 28 15:01 node25.html
-rw-r--r--   1 jrh      users        1433 May 28 15:01 node26.html
-rw-r--r--   1 jrh      users        9875 May 28 15:01 node3.html
-rw-r--r--   1 jrh      users        5747 May 28 15:01 node4.html
-rw-r--r--   1 jrh      users        3834 May 28 15:01 node5.html
-rw-r--r--   1 jrh      users        1888 May 28 15:01 node6.html
-rw-r--r--   1 jrh      users        5581 May 28 15:01 node7.html
-rw-r--r--   1 jrh      users       25757 May 28 15:01 node8.html
-rw-r--r--   1 jrh      users        6818 May 28 15:01 node9.html
-rw-r--r--   1 jrh      users         220 May 28 15:01 previous_motif.gif
-rw-r--r--   1 jrh      users        4480 May 28 15:01 printform.gif
-rw-r--r--   1 jrh      users       13199 May 28 15:01 pseform.gif
-rw-r--r--   1 jrh      users         967 May 28 15:01 reddot.gif
-rw-r--r--   1 jrh      users         112 May 28 15:01 rightarrow.gif
-rw-r--r--   1 jrh      users        7959 May 28 15:01 spectrumform.gif
-rw-r--r--   1 jrh      users         145 May 28 15:01 up_motif.gif
-rw-r--r--   1 jrh      users         114 May 28 15:01 uparrow.gif
-rw-r--r--   1 jrh      users         344 May 28 15:01 viewmol.css
-rw-r--r--   1 jrh      users       31019 May 28 15:01 viewmol.gif
-rw-r--r--   1 jrh      users        4227 May 28 15:01 viewmol.html
-rw-r--r--   1 jrh      users        4560 May 28 15:01 waveform.gif
-rw-r--r--   1 jrh      users         967 May 28 15:01 yellowdot.gif

source:
-rw-r--r--   1 jrh      users        5281 May 28 15:01 GLwDrawAP.h
-rw-r--r--   1 jrh      users        8641 May 28 15:01 GLwMDrawA.h
-rw-r--r--   1 jrh      users        8504 May 28 15:29 Makefile
-rw-r--r--   1 jrh      users        9458 May 28 15:01 annotate.c
-rw-r--r--   1 jrh      users        5787 May 28 15:01 basisform.c
-rw-r--r--   1 jrh      users        3686 May 28 15:01 bio.c
-rw-r--r--   1 jrh      users       12997 May 28 15:01 bondform.c
-rw-r--r--   1 jrh      users        6909 May 28 15:01 bondorder.c
-rw-r--r--   1 jrh      users       15859 May 28 15:01 build.c
-rw-r--r--   1 jrh      users       14066 May 28 15:01 calcmo.c
-rw-r--r--   1 jrh      users        8178 May 28 15:01 cellform.c
-rw-r--r--   1 jrh      users       31830 May 28 15:01 coledit.c
-rw-r--r--   1 jrh      users        9798 May 28 15:01 confform.c
-rw-r--r--   1 jrh      users        3287 May 28 15:01 cylinder.c
-rw-r--r--   1 jrh      users        3393 May 28 15:01 device.c
-rw-r--r--   1 jrh      users        1162 May 28 15:01 dialog.h
-rw-r--r--   1 jrh      users        1845 May 28 15:01 distort.c
-rw-r--r--   1 jrh      users       42680 May 28 15:01 draw.c
-rw-r--r--   1 jrh      users       13832 May 28 15:01 drawel.c
-rw-r--r--   1 jrh      users       14028 May 28 15:01 drawform.c
-rw-r--r--   1 jrh      users       12281 May 28 15:01 drawop.c
-rw-r--r--   1 jrh      users       18188 May 28 15:01 drawsp.c
-rw-r--r--   1 jrh      users        2778 May 28 15:01 ellipse.c
-rw-r--r--   1 jrh      users        1078 May 28 15:01 eof.c
-rw-r--r--   1 jrh      users       32111 May 28 15:01 fallbacks.h
-rw-r--r--   1 jrh      users       25449 May 28 15:01 feedback.c
-rw-r--r--   1 jrh      users        7632 May 28 15:01 fileselect.c
-rwxr-xr-x   1 jrh      users       10223 May 31 18:29 getmachine
-rw-r--r--   1 jrh      users        1644 May 28 15:01 getmem.c
-rw-r--r--   1 jrh      users       16539 May 28 15:01 getrc.c
-rw-r--r--   1 jrh      users       25414 May 28 15:01 glwdraw.c
-rw-r--r--   1 jrh      users       11557 May 28 15:01 hardcopy.c
-rw-r--r--   1 jrh      users       15515 May 28 15:01 hpgl.c
-rw-r--r--   1 jrh      users       10291 May 28 15:01 inert.c
-rw-r--r--   1 jrh      users       28383 May 28 15:01 init.c
-rw-r--r--   1 jrh      users       38461 May 28 15:01 input.c
-rw-r--r--   1 jrh      users        2606 May 28 15:01 insint.c
-rwxr-xr-x   1 jrh      users        1465 May 31 17:01 install
-rw-r--r--   1 jrh      users        7129 May 28 15:01 intern.c
-rw-r--r--   1 jrh      users       12759 May 28 15:01 isotopes.h
-rw-r--r--   1 jrh      users        4272 May 28 15:01 makemenu.c
-rw-r--r--   1 jrh      users        1848 May 28 15:01 maketics.c
-rw-r--r--   1 jrh      users        2528 May 28 15:01 manual.c
-rw-r--r--   1 jrh      users       23012 May 28 15:01 marcub.c
-rw-r--r--   1 jrh      users        1104 May 28 15:01 marcub.h
-rw-r--r--   1 jrh      users        4650 May 28 15:01 matrix.c
-rw-r--r--   1 jrh      users        1545 May 28 15:01 menu.h
-rw-r--r--   1 jrh      users        9398 May 28 15:01 menudef.h
-rw-r--r--   1 jrh      users        6789 May 28 15:01 messgb.c
-rw-r--r--   1 jrh      users       10809 May 28 15:01 messgb.h
-rw-r--r--   1 jrh      users       13633 May 28 15:01 mkconn.c
-rw-r--r--   1 jrh      users       10326 May 28 15:01 mkunitc.c
-rw-r--r--   1 jrh      users       25497 May 28 15:01 mo.c
-rw-r--r--   1 jrh      users       13573 May 28 15:01 modifygeo.c
-rw-r--r--   1 jrh      users        6292 May 28 15:01 moform.c
-rw-r--r--   1 jrh      users       34773 May 28 15:01 mouseaction.c
-rw-r--r--   1 jrh      users       11560 May 28 15:01 mousecb.c
-rw-r--r--   1 jrh      users        2200 May 28 15:01 normod.c
-rw-r--r--   1 jrh      users        6015 May 28 15:01 optiform.c
-rw-r--r--   1 jrh      users        1688 May 28 15:01 osname.c
-rw-r--r--   1 jrh      users       12840 May 28 15:01 postscript.c
-rw-r--r--   1 jrh      users       23573 May 28 15:01 printform.c
-rw-r--r--   1 jrh      users       13562 May 28 15:01 pseform.c
-rw-r--r--   1 jrh      users        9145 May 28 15:01 ray.c
-rw-r--r--   1 jrh      users        3322 May 28 15:01 raytracer.c
-rw-r--r--   1 jrh      users        3082 May 28 15:01 readframe.c
-rw-r--r--   1 jrh      users       21564 May 28 15:01 readgauss.c
-rw-r--r--   1 jrh      users        9936 May 28 15:01 readmopac.c
-rw-r--r--   1 jrh      users        5301 May 28 15:01 readpdb.c
-rw-r--r--   1 jrh      users        2196 May 28 15:01 redraw.c
-rw-r--r--   1 jrh      users        2284 May 28 15:01 resource.c
-rw-r--r--   1 jrh      users        4111 May 28 15:01 runprog.c
-rw-r--r--   1 jrh      users       18049 May 28 15:01 save.c
-rw-r--r--   1 jrh      users        4640 May 28 15:01 saveform.c
-rw-r--r--   1 jrh      users        2186 May 28 15:01 scandir.c
-rw-r--r--   1 jrh      users       19066 May 28 15:01 specform.c
-rw-r--r--   1 jrh      users        2981 May 28 15:01 thermo.c
-rw-r--r--   1 jrh      users       13261 May 28 15:01 tm.c
-rw-r--r--   1 jrh      users       19644 May 28 15:01 viewmol.c
-rw-r--r--   1 jrh      users       10921 May 28 15:01 viewmol.h
-rw-r--r--   1 jrh      users       20063 May 28 15:01 waveform.c
-rw-r--r--   1 jrh      users        1427 May 28 15:01 window.c
-rw-r--r--   1 jrh      users        2520 May 28 15:01 xfont.c
-rw-r--r--   1 jrh      users        6528 May 28 15:01 zoom.c
Modified: Mon May 31 22:35:13 1999 GMT
Page accessed 13166 times since Sat Apr 17 21:33:42 1999 GMT